API reference

• Populations, Views and Assemblies
  • Populations
    • Population
    • create()
  • Views (sub-populations)
    • PopulationView
  • Assemblies
    • Assembly
• Connectors
  • Base class
    • Connector
  • Built-in connectors
    • AllToAllConnector
    • OneToOneConnector
    • FixedProbabilityConnector
    • FromListConnector
    • FromFileConnector
    • ArrayConnector
    • FixedNumberPreConnector
    • FixedNumberPostConnector
    • FixedTotalNumberConnector
    • DistanceDependentProbabilityConnector
    • IndexBasedProbabilityConnector
    • DisplacementDependentProbabilityConnector
    • SmallWorldConnector
    • CSAConnector
    • CloneConnector
• Projections
  • Projection
    • Projection.pre
    • Projection.post
    • Projection.source
    • Projection.target
    • Projection.label
    • Projection.rng
    • Projection.synapse_dynamics
    • Projection.__len__()
    • Projection.__getitem__()
    • Projection.__iter__()
    • Projection.connections
    • Projection.MULTI_SYNAPSE_OPERATIONS
    • Projection.annotate()
    • Projection.describe()
    • Projection.get()
    • Projection.getDelays()
    • Projection.getSynapseDynamics()
    • Projection.getWeights()
    • Projection.initialize()
    • Projection.printDelays()
    • Projection.printWeights()
    • Projection.randomizeDelays()
    • Projection.randomizeSynapseDynamics()
    • Projection.randomizeWeights()
    • Projection.save()
    • Projection.saveConnections()
    • Projection.set()
    • Projection.setDelays()
    • Projection.setSynapseDynamics()
    • Projection.setWeights()
    • Projection.shape
    • Projection.size()
    • Projection.weightHistogram()
  • connect()
• Neuron models
  • Standard cell types
    • Base class
    • Simple integrate-and-fire neurons
    • Integrate-and-fire neurons with adaptation
    • Spike sources
    • Composed models
  • Native cell types
  • Utility functions
    • list_standard_models()
• Synapse models
  • Standard synapse types
    • Base class
    • Static/fixed synapses
    • Short-term plasticity mechanisms
    • Long-term plasticity mechanisms
  • Native plasticity models
  • NineML plasticity models
• Current sources
  • DCSource
    • DCSource.inject_into()
    • DCSource.get_parameters()
    • DCSource.set_parameters()
  • ACSource
    • ACSource.inject_into()
    • ACSource.get_parameters()
    • ACSource.set_parameters()
  • StepCurrentSource
    • StepCurrentSource.inject_into()
    • StepCurrentSource.get_parameters()
    • StepCurrentSource.set_parameters()
  • NoisyCurrentSource
    • NoisyCurrentSource.inject_into()
    • NoisyCurrentSource.get_parameters()
    • NoisyCurrentSource.set_parameters()
• Simulation control
  • setup()
  • run()
  • run_until()
  • reset()
  • end()
  • get_time_step()
  • get_current_time()
  • get_min_delay()
  • get_max_delay()
  • num_processes()
  • rank()
  • set()
  • initialize()
  • record()
• Random numbers
  • RandomDistribution
    • RandomDistribution.next()
    • RandomDistribution.lazily_evaluate()
  • NumpyRNG
    • NumpyRNG.translations
    • NumpyRNG.normal_clipped()
    • NumpyRNG.normal_clipped_to_boundary()
    • NumpyRNG.describe()
    • NumpyRNG.next()
  • GSLRNG
    • GSLRNG.translations
    • GSLRNG.uniform_int()
    • GSLRNG.gamma()
    • GSLRNG.normal()
    • GSLRNG.normal_clipped()
    • GSLRNG.describe()
    • GSLRNG.next()
  • NativeRNG
    • NativeRNG.next()
  • Adapting a different random number generator to work with PyNN
• Parameter handling
  • The LazyArray class
    • Reference
  • The ParameterSpace class
    • Reference
  • The Sequence class
    • Sequence
• Spatial structure
  • Structure classes
    • BaseStructure
    • Line
    • Grid2D
    • Grid3D
    • RandomStructure
  • Shape classes
    • Cuboid
    • Sphere
  • The Space class
    • Space
  • Implementing your own Shape
  • Implementing your own Structure
• Utility classes and functions
  • init_logging()
  • get_simulator()
  • Timer
    • Timer.start()
    • Timer.elapsed_time()
    • Timer.elapsedTime()
    • Timer.reset()
    • Timer.diff()
    • Timer.time_in_words()
    • Timer.mark()
  • ProgressBar
    • ProgressBar.set_level()
  • notify()
  • save_population()
  • load_population()
  • Basic plotting
    • Figure
    • Panel
    • comparison_plot()