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@500
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[500]
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11/17/08 17:45:45 |
apdavison |
Trying to get distributed testing working |
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@499
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[499]
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11/14/08 17:04:33 |
apdavison |
Updated tests to use new NeuroTools (0.1) |
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@497
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[497]
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11/14/08 14:41:42 |
pierre |
Bugs in nest2old with the imported packaged, that have not been renamed |
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@496
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[496]
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11/13/08 11:44:29 |
pierre |
Little confusion between all the nest versions... Because mine is also … |
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@495
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[495]
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11/13/08 11:38:29 |
pierre |
Split the NEST 2 packages into two packages: oldnest2 (old pynest API, … |
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@494
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[494]
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11/07/08 17:59:43 |
apdavison |
Added a not-entirely-satisfactory workaround for what seems to be a PCSIM … |
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@493
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[493]
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11/07/08 17:21:45 |
apdavison |
Added a new test script - some problems with PCSIM dropping spikes |
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@490
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[490]
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11/06/08 23:16:07 |
apdavison |
Moved the MultiSim class from test/multisim.py into the utility … |
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@488
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[488]
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11/06/08 17:41:37 |
apdavison |
In PCSIM, the STDP synapses have a parameter STDPgap, which needs to be … |
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@486
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[486]
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11/06/08 15:29:59 |
apdavison |
neuron and pcsim modules used to overwrite the self.label … |
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@485
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[485]
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11/06/08 14:07:27 |
apdavison |
More messing around with tests |
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@483
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[483]
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11/05/08 17:24:35 |
apdavison |
Made some progress in getting the same results with PCSIM as with NEST and … |
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@482
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[482]
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11/04/08 15:50:26 |
apdavison |
Now, if there is more than one possible synapse model, the Projection … |
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@481
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[481]
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11/04/08 15:00:06 |
pierre |
This commit is crucial if you want to have a nice interface between pyNN … |
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@480
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[480]
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11/04/08 14:22:09 |
apdavison |
Dynamic synapses now work in the pcsim module for current-based … |
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@479
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[479]
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11/04/08 14:20:40 |
apdavison |
Fixed a couple of docstrings and a bug in the neuron module |
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@473
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[473]
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10/15/08 17:35:32 |
pierre |
Fix a small bug in the redraw method of the RandomDistribution? objects |
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@472
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[472]
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10/08/08 18:01:23 |
apdavison |
Replaced from pypcsim import * with import pypcsim. I probably haven't … |
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@471
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[471]
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10/08/08 17:09:20 |
apdavison |
Projection.saveConnections(), printWeights() and weightHistogram() … |
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@470
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[470]
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10/08/08 14:19:58 |
apdavison |
Partial implementation of Population.record_c() and print_c() for the … |
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@469
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[469]
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10/08/08 14:12:44 |
apdavison |
Minor documentation typos |
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@468
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[468]
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10/04/08 00:21:06 |
apdavison |
Wrote a bunch more unit tests for nest2 module.
Code coverage went from … |
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@467
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[467]
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10/02/08 16:58:17 |
apdavison |
pcsim Connectors now handle arrays of weights/delays (see ticket:116). |
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@466
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[466]
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10/02/08 13:25:24 |
apdavison |
Partial implementation of FromListConnector and FromFileConnector for … |
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@465
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[465]
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10/02/08 11:38:28 |
apdavison |
Various minor bug-fixes |
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@464
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[464]
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09/29/08 18:24:09 |
bruederle |
Changed tau_ref for hardware neuron model from 0.4ms to 1.0ms. Old … |
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@463
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[463]
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09/24/08 08:58:30 |
pierre |
Some minors fixes in neuron2. I'm not really using it, but when i tried to … |
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@462
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[462]
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09/19/08 08:29:29 |
JensKremkow |
added in getSpikes/v/c compatible_output flag. Now one can get the offical … |
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@458
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[458]
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09/10/08 15:20:11 |
apdavison |
In nest2, defer creating the NEST recording device (in the Recorder … |
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@445
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[445]
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08/20/08 11:50:41 |
apdavison |
I hadn't realized that the $Rev$ keyword only reflects the last revision … |
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@444
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[444]
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08/20/08 11:42:21 |
apdavison |
gather=True is working again for neuron.
When writing compatible … |
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@443
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[443]
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08/20/08 11:37:23 |
apdavison |
Added neuron2 and brian to list of modules |
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@442
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[442]
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08/12/08 15:03:46 |
pierre |
Sorry, wrong files were commited, the lambda function are not correct.… |
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@441
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[441]
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08/12/08 14:37:01 |
pierre |
Minors optimization and cleanup in the … |
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@440
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[440]
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08/12/08 14:29:40 |
apdavison |
Fixed bug #109, although I'm not sure I've tested all the possible … |
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@439
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[439]
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08/12/08 14:18:42 |
pierre |
Optimization of the set() method in nest2, using a simple call to … |
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@438
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[438]
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08/12/08 13:42:00 |
apdavison |
Comment out printf statements in src/hoc/tmgsyn.mod (see ticket #112) |
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@437
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[437]
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08/11/08 15:32:39 |
pierre |
Fix the bug with any for version of python above 2.5. just use the numpy … |
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@436
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[436]
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08/10/08 12:31:00 |
pierre |
Add the possibility of having delays for SpikeSourceArray? and … |
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@435
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[435]
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08/07/08 19:19:34 |
pierre |
Continue the work on the brian API. All the standard cells models are now … |
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@434
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[434]
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08/07/08 18:48:44 |
pierre |
Fix a bug in the new rset method, faster (only one call to … |
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@433
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[433]
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08/05/08 13:59:20 |
pierre |
Work on nest2.py, still to improve the building time of a large network. … |
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@432
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[432]
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08/04/08 19:01:06 |
pierre |
Error in the brian cells.py file, where I've left some units that may rise … |
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@431
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[431]
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08/01/08 16:27:53 |
apdavison |
Fixed bug in neuron module: Population.tset() did not properly handle … |
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@430
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[430]
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07/31/08 10:18:24 |
apdavison |
Can now save conductance recordings with nest2 using … |
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@429
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[429]
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07/29/08 09:54:23 |
apdavison |
Modifications to work with NEST 1.9.7550 |
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@428
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[428]
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07/27/08 18:25:09 |
pierre |
Typo bug… |
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@427
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[427]
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07/27/08 18:22:35 |
pierre |
Some work performed on the brian implementation of the pyNN API, after … |
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@426
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[426]
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07/22/08 16:28:09 |
apdavison |
Fixed a problem in nest2.Recorder.record() after using dynamic synapses. |
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@425
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[425]
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07/20/08 20:31:25 |
apdavison |
Fixed typo in nest2.Recorder.write() (see ticket #107). Note: need to … |
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@424
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[424]
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07/18/08 14:28:56 |
apdavison |
Now when you try to write data to a file, any existing file of the same … |
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@423
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[423]
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07/17/08 20:37:45 |
apdavison |
Started modifications to allow specifying an open file to write data to … |
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@421
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[421]
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07/17/08 09:34:30 |
pierre |
Modification of the RandomDistribution? object to allow the specification … |
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@416
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[416]
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07/16/08 10:40:43 |
apdavison |
Harmonization of logging setup across simulators (see #66). Also fixes bug … |
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@415
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[415]
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07/16/08 10:35:16 |
pierre |
Add the possibility, in the common.py file, to select a particular model … |
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@414
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[414]
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07/16/08 09:47:16 |
apdavison |
Harmonization of describe() methods across simulators, by moving its … |
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@413
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[413]
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07/15/08 14:31:49 |
apdavison |
First attempt to provide an interface for injecting arbitrary currents … |
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@412
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[412]
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07/15/08 12:52:03 |
apdavison |
Ticket #104 points out that if compatible_output is False and there is … |
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@411
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[411]
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07/14/08 16:26:23 |
apdavison |
Changed a few tabs to spaces. Please folks, check your editors insert four … |
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@410
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[410]
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07/14/08 16:08:37 |
apdavison |
The attempted optimisation of setting parameter values in r408 broke the … |
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@409
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[409]
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07/10/08 17:08:21 |
pierre |
Add a gather function to the nest2 api in the distributed mode. Now we can … |
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@408
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[408]
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07/10/08 12:45:18 |
pierre |
Start to play with nest2.py in a distributed simulation framework. Add a … |
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@407
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[407]
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07/03/08 03:17:50 |
pierre |
Implement the Gutig rule and the van Rossum rule of plasticity in nest2, … |
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@406
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[406]
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06/28/08 10:07:29 |
pierre |
Finished the cleanup of post/pre connectors and correct a bug therefore in … |
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@405
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[405]
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06/28/08 09:39:13 |
pierre |
Confusion in the FixNumberPre? and FixNumberPost? connectors in nest2 as … |
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@404
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[404]
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06/27/08 04:05:10 |
pierre |
Continue the enhancement of the distantdependentConnectors. Almost … |
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@403
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[403]
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06/26/08 17:17:12 |
apdavison |
More modifications to neuron2 to pass generictests.py |
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@402
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[402]
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06/26/08 16:29:47 |
bruederle |
In function Recorder.get() for recording to memory: 'spikes' replaced by … |
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@401
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[401]
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06/26/08 15:51:23 |
bruederle |
Removed an obvious cut'n'paste bug. |
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@400
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[400]
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06/26/08 15:50:42 |
bruederle |
Variable 'padding' was not initialized correctly |
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@399
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[399]
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06/26/08 14:52:10 |
pierre |
Update also the nest1 DistantDependantProbabilityConnector? to be coherent. … |
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@398
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[398]
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06/26/08 14:05:31 |
pierre |
I don't have commited the good files.... Sorry. |
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@397
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[397]
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06/26/08 13:49:29 |
pierre |
Great improvement of the distance dependant distance. Speed up … |
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@396
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[396]
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06/26/08 13:39:39 |
apdavison |
The bugfix in r392 uncovered another problem: we should accept either … |
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@394
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[394]
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06/26/08 11:15:39 |
apdavison |
Fixed a couple of bugs in neuron2: delays not getting set properly to … |
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@392
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[392]
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06/26/08 10:36:28 |
pierre |
Fix a bug in the periodic boundaries conditions if those are specified by … |
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@391
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[391]
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06/24/08 18:12:10 |
apdavison |
Work on updating regression tests. Fixed a bug in connect() function in … |
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@390
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[390]
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06/24/08 15:45:55 |
apdavison |
Tests now write output to a Results subdirectory of test, to avoid … |
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@389
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[389]
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06/24/08 14:45:50 |
bkaplan |
nest2:end() tempdirs list stops growing |
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@388
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[388]
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06/24/08 13:33:05 |
apdavison |
Minor change in neuron2 to avoid problems with numpy versions < 1.1.0 |
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@387
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[387]
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06/23/08 17:32:59 |
apdavison |
In neuron2, implemented randomizeWeights(), randomizeDelays() and … |
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@386
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[386]
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06/23/08 14:41:33 |
bruederle |
Removed parameter e_rev_E from set of adjustable ones. |
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@385
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[385]
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06/22/08 16:34:33 |
pierre |
Sounds more nice to have a parent attribute for the subpopulation that … |
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@384
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[384]
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06/21/08 09:29:19 |
pierre |
Enhancement of the rough getSubPopulation() method, that seems to be … |
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@383
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[383]
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06/21/08 08:39:07 |
pierre |
Implement a rough getSubPopulation() function in the common.py file and … |
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@382
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[382]
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06/21/08 07:23:49 |
pierre |
Fix a minor bug in the describe() function of nest2 when called with more … |
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@381
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[381]
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06/21/08 05:59:46 |
pierre |
Fix the bug on plasticity, that was just a dictionnary problem. … |
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@380
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[380]
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06/21/08 05:15:22 |
pierre |
MAJOR typo bug in the describe function. How a single symbol car perturb a … |
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@379
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[379]
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06/20/08 16:47:59 |
apdavison |
Got some more Connectors working in neuron2. |
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@378
|
[378]
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06/20/08 13:01:57 |
apdavison |
Removed a few debugging statements in neuron2. |
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@377
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[377]
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06/19/08 18:01:38 |
apdavison |
Major reorganisation of neuron2 to better encapsulate global simulator … |
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@376
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[376]
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06/19/08 15:54:15 |
apdavison |
More work on getting unit tests for neuron2 running |
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@375
|
[375]
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06/18/08 17:30:31 |
apdavison |
Native cells defined as Python classes now work with the neuron2 … |
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@374
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[374]
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06/18/08 15:39:28 |
apdavison |
Some harmonization of attribute names across simulators. |
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@373
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[373]
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06/18/08 14:57:35 |
apdavison |
Fixed a couple of bugs introduced in recent commits.
Note, in nest2, … |
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@372
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[372]
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06/18/08 14:47:45 |
apdavison |
recording.write_compatible_output() now takes an input_format … |
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@371
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[371]
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06/18/08 14:02:10 |
apdavison |
Initia lization of membrane potentials now works in neuron2 |
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@370
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[370]
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06/17/08 20:00:03 |
bruederle |
removed an obvious typo |
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@369
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[369]
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06/17/08 19:57:26 |
bruederle |
for the hardware neuron model, the set of manipulatable parameters has … |
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@368
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[368]
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06/17/08 19:53:19 |
bruederle |
for the hardware neuron model, the set of manipulatable parameters has … |
