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@468
|
[468]
|
10/04/08 00:21:06 |
apdavison |
Wrote a bunch more unit tests for nest2 module.
Code coverage went from … |
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@467
|
[467]
|
10/02/08 16:58:17 |
apdavison |
pcsim Connectors now handle arrays of weights/delays (see ticket:116). |
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@466
|
[466]
|
10/02/08 13:25:24 |
apdavison |
Partial implementation of FromListConnector and FromFileConnector for … |
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@465
|
[465]
|
10/02/08 11:38:28 |
apdavison |
Various minor bug-fixes |
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@464
|
[464]
|
09/29/08 18:24:09 |
bruederle |
Changed tau_ref for hardware neuron model from 0.4ms to 1.0ms. Old … |
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@463
|
[463]
|
09/24/08 08:58:30 |
pierre |
Some minors fixes in neuron2. I'm not really using it, but when i tried to … |
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@462
|
[462]
|
09/19/08 08:29:29 |
JensKremkow |
added in getSpikes/v/c compatible_output flag. Now one can get the offical … |
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@461
|
[461]
|
09/10/08 17:36:29 |
apdavison |
Added PDF of INCF poster |
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@460
|
[460]
|
09/10/08 17:32:48 |
apdavison |
Copied poster to tags/INCF2008 |
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@459
|
[459]
|
09/10/08 17:31:53 |
apdavison |
Added copyright statement |
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@458
|
[458]
|
09/10/08 15:20:11 |
apdavison |
In nest2, defer creating the NEST recording device (in the Recorder … |
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@457
|
[457]
|
09/02/08 14:40:56 |
apdavison |
Changed poster to portrait format |
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@456
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[456]
|
09/01/08 23:37:58 |
apdavison |
This version seems ok for INCF 2008. Refactoring not finished, though |
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@455
|
[455]
|
09/01/08 18:35:57 |
apdavison |
Started refactoring to give a more object-oriented, easy-to-use approach |
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@454
|
[454]
|
09/01/08 16:40:15 |
apdavison |
Ported changes to wikidoc.py from 0.3 branch |
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@453
|
[453]
|
09/01/08 16:35:37 |
apdavison |
Started adapting poster.py to PyNN v0.4 |
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@452
|
[452]
|
08/29/08 14:38:04 |
apdavison |
Renamed Python script for generating poster |
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@451
|
[451]
|
08/29/08 14:34:25 |
apdavison |
Tagged poster version shown at CNS2007 |
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@450
|
[450]
|
08/29/08 14:33:46 |
apdavison |
Moved doc/CNS2007 to doc/poster/trunk |
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@449
|
[449]
|
08/29/08 14:33:23 |
apdavison |
-- |
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@448
|
[448]
|
08/29/08 14:31:26 |
apdavison |
-- |
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@447
|
[447]
|
08/29/08 14:31:12 |
apdavison |
-- |
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@446
|
[446]
|
08/29/08 14:31:01 |
apdavison |
-- |
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@445
|
[445]
|
08/20/08 11:50:41 |
apdavison |
I hadn't realized that the $Rev$ keyword only reflects the last revision … |
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@444
|
[444]
|
08/20/08 11:42:21 |
apdavison |
gather=True is working again for neuron.
When writing compatible … |
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@443
|
[443]
|
08/20/08 11:37:23 |
apdavison |
Added neuron2 and brian to list of modules |
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@442
|
[442]
|
08/12/08 15:03:46 |
pierre |
Sorry, wrong files were commited, the lambda function are not correct.… |
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@441
|
[441]
|
08/12/08 14:37:01 |
pierre |
Minors optimization and cleanup in the … |
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@440
|
[440]
|
08/12/08 14:29:40 |
apdavison |
Fixed bug #109, although I'm not sure I've tested all the possible … |
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@439
|
[439]
|
08/12/08 14:18:42 |
pierre |
Optimization of the set() method in nest2, using a simple call to … |
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@438
|
[438]
|
08/12/08 13:42:00 |
apdavison |
Comment out printf statements in src/hoc/tmgsyn.mod (see ticket #112) |
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@437
|
[437]
|
08/11/08 15:32:39 |
pierre |
Fix the bug with any for version of python above 2.5. just use the numpy … |
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@436
|
[436]
|
08/10/08 12:31:00 |
pierre |
Add the possibility of having delays for SpikeSourceArray? and … |
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@435
|
[435]
|
08/07/08 19:19:34 |
pierre |
Continue the work on the brian API. All the standard cells models are now … |
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@434
|
[434]
|
08/07/08 18:48:44 |
pierre |
Fix a bug in the new rset method, faster (only one call to … |
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@433
|
[433]
|
08/05/08 13:59:20 |
pierre |
Work on nest2.py, still to improve the building time of a large network. … |
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@432
|
[432]
|
08/04/08 19:01:06 |
pierre |
Error in the brian cells.py file, where I've left some units that may rise … |
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@431
|
[431]
|
08/01/08 16:27:53 |
apdavison |
Fixed bug in neuron module: Population.tset() did not properly handle … |
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@430
|
[430]
|
07/31/08 10:18:24 |
apdavison |
Can now save conductance recordings with nest2 using … |
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@429
|
[429]
|
07/29/08 09:54:23 |
apdavison |
Modifications to work with NEST 1.9.7550 |
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@428
|
[428]
|
07/27/08 18:25:09 |
pierre |
Typo bug… |
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@427
|
[427]
|
07/27/08 18:22:35 |
pierre |
Some work performed on the brian implementation of the pyNN API, after … |
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@426
|
[426]
|
07/22/08 16:28:09 |
apdavison |
Fixed a problem in nest2.Recorder.record() after using dynamic synapses. |
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@425
|
[425]
|
07/20/08 20:31:25 |
apdavison |
Fixed typo in nest2.Recorder.write() (see ticket #107). Note: need to … |
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@424
|
[424]
|
07/18/08 14:28:56 |
apdavison |
Now when you try to write data to a file, any existing file of the same … |
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@423
|
[423]
|
07/17/08 20:37:45 |
apdavison |
Started modifications to allow specifying an open file to write data to … |
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@422
|
[422]
|
07/17/08 12:39:15 |
apdavison |
Attempt at duplication reduction in pcsim module. Untested as I don't … |
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@421
|
[421]
|
07/17/08 09:34:30 |
pierre |
Modification of the RandomDistribution? object to allow the specification … |
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@420
|
[420]
|
07/16/08 20:09:31 |
apdavison |
More duplication reduction |
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@419
|
[419]
|
07/16/08 17:25:05 |
apdavison |
In harmonize branch, created a simulator module within nest2 and … |
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@418
|
[418]
|
07/16/08 15:38:30 |
apdavison |
In harmonize branch, moved common code from the definitions of the … |
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@417
|
[417]
|
07/16/08 13:04:39 |
apdavison |
Created branch to reduce code duplication and simplify code by harmonizing … |
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@416
|
[416]
|
07/16/08 10:40:43 |
apdavison |
Harmonization of logging setup across simulators (see #66). Also fixes bug … |
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@415
|
[415]
|
07/16/08 10:35:16 |
pierre |
Add the possibility, in the common.py file, to select a particular model … |
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@414
|
[414]
|
07/16/08 09:47:16 |
apdavison |
Harmonization of describe() methods across simulators, by moving its … |
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@413
|
[413]
|
07/15/08 14:31:49 |
apdavison |
First attempt to provide an interface for injecting arbitrary currents … |
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@412
|
[412]
|
07/15/08 12:52:03 |
apdavison |
Ticket #104 points out that if compatible_output is False and there is … |
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@411
|
[411]
|
07/14/08 16:26:23 |
apdavison |
Changed a few tabs to spaces. Please folks, check your editors insert four … |
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@410
|
[410]
|
07/14/08 16:08:37 |
apdavison |
The attempted optimisation of setting parameter values in r408 broke the … |
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@409
|
[409]
|
07/10/08 17:08:21 |
pierre |
Add a gather function to the nest2 api in the distributed mode. Now we can … |
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@408
|
[408]
|
07/10/08 12:45:18 |
pierre |
Start to play with nest2.py in a distributed simulation framework. Add a … |
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@407
|
[407]
|
07/03/08 03:17:50 |
pierre |
Implement the Gutig rule and the van Rossum rule of plasticity in nest2, … |
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@406
|
[406]
|
06/28/08 10:07:29 |
pierre |
Finished the cleanup of post/pre connectors and correct a bug therefore in … |
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@405
|
[405]
|
06/28/08 09:39:13 |
pierre |
Confusion in the FixNumberPre? and FixNumberPost? connectors in nest2 as … |
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@404
|
[404]
|
06/27/08 04:05:10 |
pierre |
Continue the enhancement of the distantdependentConnectors. Almost … |
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@403
|
[403]
|
06/26/08 17:17:12 |
apdavison |
More modifications to neuron2 to pass generictests.py |
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@402
|
[402]
|
06/26/08 16:29:47 |
bruederle |
In function Recorder.get() for recording to memory: 'spikes' replaced by … |
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@401
|
[401]
|
06/26/08 15:51:23 |
bruederle |
Removed an obvious cut'n'paste bug. |
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@400
|
[400]
|
06/26/08 15:50:42 |
bruederle |
Variable 'padding' was not initialized correctly |
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@399
|
[399]
|
06/26/08 14:52:10 |
pierre |
Update also the nest1 DistantDependantProbabilityConnector? to be coherent. … |
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@398
|
[398]
|
06/26/08 14:05:31 |
pierre |
I don't have commited the good files.... Sorry. |
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@397
|
[397]
|
06/26/08 13:49:29 |
pierre |
Great improvement of the distance dependant distance. Speed up … |
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@396
|
[396]
|
06/26/08 13:39:39 |
apdavison |
The bugfix in r392 uncovered another problem: we should accept either … |
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@395
|
[395]
|
06/26/08 11:16:18 |
apdavison |
Removed dependence on NeuroTools/pygsl of some of the tests. |
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@394
|
[394]
|
06/26/08 11:15:39 |
apdavison |
Fixed a couple of bugs in neuron2: delays not getting set properly to … |
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@393
|
[393]
|
06/26/08 11:12:09 |
apdavison |
Moved unit tests into their own subdirectory |
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@392
|
[392]
|
06/26/08 10:36:28 |
pierre |
Fix a bug in the periodic boundaries conditions if those are specified by … |
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@391
|
[391]
|
06/24/08 18:12:10 |
apdavison |
Work on updating regression tests. Fixed a bug in connect() function in … |
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@390
|
[390]
|
06/24/08 15:45:55 |
apdavison |
Tests now write output to a Results subdirectory of test, to avoid … |
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@389
|
[389]
|
06/24/08 14:45:50 |
bkaplan |
nest2:end() tempdirs list stops growing |
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@388
|
[388]
|
06/24/08 13:33:05 |
apdavison |
Minor change in neuron2 to avoid problems with numpy versions < 1.1.0 |
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@387
|
[387]
|
06/23/08 17:32:59 |
apdavison |
In neuron2, implemented randomizeWeights(), randomizeDelays() and … |
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@386
|
[386]
|
06/23/08 14:41:33 |
bruederle |
Removed parameter e_rev_E from set of adjustable ones. |
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@385
|
[385]
|
06/22/08 16:34:33 |
pierre |
Sounds more nice to have a parent attribute for the subpopulation that … |
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@384
|
[384]
|
06/21/08 09:29:19 |
pierre |
Enhancement of the rough getSubPopulation() method, that seems to be … |
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@383
|
[383]
|
06/21/08 08:39:07 |
pierre |
Implement a rough getSubPopulation() function in the common.py file and … |
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|
@382
|
[382]
|
06/21/08 07:23:49 |
pierre |
Fix a minor bug in the describe() function of nest2 when called with more … |
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|
@381
|
[381]
|
06/21/08 05:59:46 |
pierre |
Fix the bug on plasticity, that was just a dictionnary problem. … |
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@380
|
[380]
|
06/21/08 05:15:22 |
pierre |
MAJOR typo bug in the describe function. How a single symbol car perturb a … |
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|
@379
|
[379]
|
06/20/08 16:47:59 |
apdavison |
Got some more Connectors working in neuron2. |
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|
@378
|
[378]
|
06/20/08 13:01:57 |
apdavison |
Removed a few debugging statements in neuron2. |
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@377
|
[377]
|
06/19/08 18:01:38 |
apdavison |
Major reorganisation of neuron2 to better encapsulate global simulator … |
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@376
|
[376]
|
06/19/08 15:54:15 |
apdavison |
More work on getting unit tests for neuron2 running |
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@375
|
[375]
|
06/18/08 17:30:31 |
apdavison |
Native cells defined as Python classes now work with the neuron2 … |
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@374
|
[374]
|
06/18/08 15:39:28 |
apdavison |
Some harmonization of attribute names across simulators. |
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|
@373
|
[373]
|
06/18/08 14:57:35 |
apdavison |
Fixed a couple of bugs introduced in recent commits.
Note, in nest2, … |
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|
@372
|
[372]
|
06/18/08 14:47:45 |
apdavison |
recording.write_compatible_output() now takes an input_format … |
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@371
|
[371]
|
06/18/08 14:02:10 |
apdavison |
Initia lization of membrane potentials now works in neuron2 |
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|
@370
|
[370]
|
06/17/08 20:00:03 |
bruederle |
removed an obvious typo |
|
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|
@369
|
[369]
|
06/17/08 19:57:26 |
bruederle |
for the hardware neuron model, the set of manipulatable parameters has … |
