The OpenElectrophy project aims to simplify data and analysis sharing for intra- and extra-cellular recordings.

The software has two levels of use:

1. It has an intuitive graphic user interface (GUI). With a few clicks, you can explore your data: manage your recording database, plot, organize, and perform first order analysis (time frequency, spike detection, spike rate, phase locking, ...)
2. It is a python package with which you can write your own analysis in script style (ala MATLAB). Thus, it provides a framework for arranging data and a standard for coding analysis in a such way that you can re-use them on other databases.

This software is written in Python, and based on a MySQL database. It manages large amounts of data easily and efficiently thanks to SQL queries, while allowing sophisticated analysis with the (Sci)entific tools for (Py)thon package: scipy.

Installation

• How to install OpenElectrophy

Documentation

• Getting started
• Philosophy ?
• Documentation reference
• Script tutorial ?

Sample data files

• Download sample files for testing OpenElectrophy

Analysis repository

• A collection of script examples using OpenElectrophy ?

Licence

• licence : Cecill v2

Author

• author : Samuel Garcia, Nicolas Fourcaud-Trocmé

Mailing list

• : The OpenElectrophy mailing list using Google group

The Neural Ensemble Ring

• http://neuralensemble.org/trac/PyNN
• http://neuralensemble.org/trac/nrnpy
• http://neuralensemble.org/trac/NeuroTools

For a complete list of local wiki pages, see TitleIndex.