cellclass.rng

Revision 19, 30.7 kB (checked in by debeissat, 1 year ago)
adding units.rng in order to be able to add units to values of cellclass parameters in FacetsML

Line
1	<?xml version="1.0" encoding="UTF-8"?>
2	<?xml-stylesheet type="text/xsl" href="../../transformations/RNGtoHTMLform_standalone.xsl"?>
3	<rng:grammar ns="http://neuralensemble.org/FacetsML/cellclass"
4	xmlns:rng="http://relaxng.org/ns/structure/1.0"
5	xmlns:a="http://relaxng.org/ns/compatibility/annotations/1.0"
6	datatypeLibrary="http://www.w3.org/2001/XMLSchema-datatypes">
7
8	<rng:include ns="http://neuralensemble.org/FacetsML/units" href="units.rng"/>
9
10	<rng:start combine="choice">
11	<rng:ref name="cellclass"/>
12	</rng:start>
13
14	<rng:define name="cellclass">
15	<a:documentation>
16	<style>
17	table {
18	border: 1px outset;
19	}
20	td {
21	border: 1px inset;
22	}
23	</style>
24	</a:documentation>
25	<rng:choice>
26	<rng:ref name="IF_curr_alpha"/>
27	<rng:ref name="IF_curr_exp"/>
28	<rng:ref name="IF_cond_alpha"/>
29	<rng:ref name="IF_cond_exp"/>
30	<rng:ref name="IF_cond_exp_sfa_rr"/>
31	<rng:ref name="AdaptiveExponentialIF_alpha"/>
32	<rng:ref name="SpikeSourcePoisson"/>
33	<rng:ref name="SpikeSourceArray"/>
34	<rng:ref name="NonStandardCellType"/>
35	</rng:choice>
36	</rng:define>
37
38	<rng:define name="IF_curr_alpha">
39	<rng:element name="IF_curr_alpha">
40	<a:documentation>
41	default_parameters = {<table><tr><td>
42	'v_rest'</td><td> -65.0</td><td>Resting membrane potential in mV.</td></tr><tr><td>
43	'cm' </td><td> 1.0, </td><td>Capacity of the membrane in nF </td></tr><tr><td>
44	'tau_m' </td><td> 20.0, </td><td>Membrane time constant in ms. </td></tr><tr><td>
45	'tau_refrac' </td><td> 0.0, </td><td>Duration of refractory period in ms. </td></tr><tr><td>
46	'tau_syn' </td><td> 5.0, </td><td>Rise time of the synaptic alpha function in ms.</td></tr><tr><td>
47	'i_offset' </td><td> 0.0, </td><td>Offset current in nA </td></tr><tr><td>
48	'v_reset' </td><td> -65.0, </td><td>Reset potential after a spike in mV. </td></tr><tr><td>
49	'v_thresh' </td><td> -50.0, </td><td>Spike threshold in mV. </td></tr><tr><td>
50	'v_init' </td><td> -65.0, </td><td>Membrane potential in mV at t = 0 </td></tr>
51	</table>
52	}<br/>
53	</a:documentation>
54	<rng:optional>
55	<rng:attribute name="v_rest">
56	<rng:ref name="float_time_unit"/>
57	</rng:attribute>
58	</rng:optional>
59	<rng:optional>
60	<rng:attribute name="cm">
61	<rng:ref name="float_capacitance_unit"/>
62	</rng:attribute>
63	</rng:optional>
64	<rng:optional>
65	<rng:attribute name="tau_m">
66	<rng:ref name="float_time_unit"/>
67	</rng:attribute>
68	</rng:optional>
69	<rng:optional>
70	<rng:attribute name="tau_refrac">
71	<rng:ref name="float_time_unit"/>
72	</rng:attribute>
73	</rng:optional>
74	<rng:optional>
75	<rng:attribute name="tau_syn">
76	<rng:ref name="float_time_unit"/>
77	</rng:attribute>
78	</rng:optional>
79	<rng:optional>
80	<rng:attribute name="i_offset">
81	<rng:ref name="float_current_unit"/>
82	</rng:attribute>
83	</rng:optional>
84	<rng:optional>
85	<rng:attribute name="v_reset">
86	<rng:ref name="float_voltage_unit"/>
87	</rng:attribute>
88	</rng:optional>
89	<rng:optional>
90	<rng:attribute name="v_thresh">
91	<rng:ref name="float_voltage_unit"/>
92	</rng:attribute>
93	</rng:optional>
94	<rng:optional>
95	<rng:attribute name="v_init">
96	<rng:ref name="float_voltage_unit"/>
97	</rng:attribute>
98	</rng:optional>
99	</rng:element>
100	</rng:define>
101
102	<rng:define name="IF_curr_exp">
103	<rng:element name="IF_curr_exp">
104	<a:documentation>
105	default_parameters = {<table><tr><td>
106	'v_rest' </td><td>-65.0, </td><td>Resting membrane potential in mV.</td></tr><tr><td>
107	'cm' </td><td>1.0, </td><td>Capacity of the membrane in nF</td></tr><tr><td>
108	'tau_m' </td><td>20.0, </td><td>Membrane time constant in ms.</td></tr><tr><td>
109	'tau_refrac'</td><td>0.0, </td><td>Duration of refractory period in ms. </td></tr><tr><td>
110	'tau_syn_E' </td><td>5.0, </td><td>Decay time of excitatory synaptic current in ms.</td></tr><tr><td>
111	'tau_syn_I' </td><td>5.0, </td><td>Decay time of inhibitory synaptic current in ms.</td></tr><tr><td>
112	'i_offset' </td><td>0.0, </td><td>Offset current in nA</td></tr><tr><td>
113	'v_reset' </td><td>-65.0, </td><td>Reset potential after a spike in mV.</td></tr><tr><td>
114	'v_thresh' </td><td>-50.0, </td><td>Spike threshold in mV.</td></tr><tr><td>
115	'v_init' </td><td>-65.0, </td><td>Membrane potential in mV at t = 0</td></tr></table>
116	}<br/>
117	</a:documentation>
118	<rng:optional>
119	<rng:attribute name="v_rest">
120	<rng:ref name="float_voltage_unit"/>
121	</rng:attribute>
122	</rng:optional>
123	<rng:optional>
124	<rng:attribute name="cm">
125	<rng:ref name="float_capacitance_unit"/>
126	</rng:attribute>
127	</rng:optional>
128	<rng:optional>
129	<rng:attribute name="tau_m">
130	<rng:ref name="float_time_unit"/>
131	</rng:attribute>
132	</rng:optional>
133	<rng:optional>
134	<rng:attribute name="tau_refrac">
135	<rng:ref name="float_time_unit"/>
136	</rng:attribute>
137	</rng:optional>
138	<rng:optional>
139	<rng:attribute name="tau_syn_E">
140	<rng:ref name="float_time_unit"/>
141	</rng:attribute>
142	</rng:optional>
143	<rng:optional>
144	<rng:attribute name="tau_syn_I">
145	<rng:ref name="float_time_unit"/>
146	</rng:attribute>
147	</rng:optional>
148	<rng:optional>
149	<rng:attribute name="i_offset">
150	<rng:ref name="float_current_unit"/>
151	</rng:attribute>
152	</rng:optional>
153	<rng:optional>
154	<rng:attribute name="v_reset">
155	<rng:ref name="float_voltage_unit"/>
156	</rng:attribute>
157	</rng:optional>
158	<rng:optional>
159	<rng:attribute name="v_thresh">
160	<rng:ref name="float_voltage_unit"/>
161	</rng:attribute>
162	</rng:optional>
163	<rng:optional>
164	<rng:attribute name="v_init">
165	<rng:ref name="float_voltage_unit"/>
166	</rng:attribute>
167	</rng:optional>
168	</rng:element>
169	</rng:define>
170
171	<rng:define name="IF_cond_alpha">
172	<rng:element name="IF_cond_alpha">
173	<a:documentation>
174	default_parameters = {<table><tr><td>
175	'v_rest' </td><td>-65.0, </td><td>Resting membrane potential in mV.</td></tr><tr><td>
176	'cm' </td><td>1.0, </td><td>Capacity of the membrane in nF</td></tr><tr><td>
177	'tau_m' </td><td>20.0, </td><td>Membrane time constant in ms.</td></tr><tr><td>
178	'tau_refrac'</td><td>0.0, </td><td>Duration of refractory period in ms.</td></tr><tr><td>
179	'tau_syn_E' </td><td>0.3, </td><td>Rise time of the excitatory synaptic alpha function in ms.</td></tr><tr><td>
180	'tau_syn_I' </td><td>0.5, </td><td>Rise time of the inhibitory synaptic alpha function in ms.</td></tr><tr><td>
181	'e_rev_E' </td><td>0.0, </td><td>Reversal potential for excitatory input in mV</td></tr><tr><td>
182	'e_rev_I' </td><td>-70.0, </td><td>Reversal potential for inhibitory input in mV</td></tr><tr><td>
183	'v_thresh' </td><td>-50.0, </td><td>Spike threshold in mV.</td></tr><tr><td>
184	'v_reset' </td><td>-65.0, </td><td>Reset potential after a spike in mV.</td></tr><tr><td>
185	'i_offset' </td><td>0.0, </td><td>Offset current in nA</td></tr><tr><td>
186	'v_init' </td><td>-65.0, </td><td>Membrane potential in mV at t = 0</td></tr></table>
187	}<br/>
188	</a:documentation>
189	<rng:optional>
190	<rng:attribute name="v_rest">
191	<rng:ref name="float_voltage_unit"/>
192	</rng:attribute>
193	</rng:optional>
194	<rng:optional>
195	<rng:attribute name="cm">
196	<rng:ref name="float_capacitance_unit"/>
197	</rng:attribute>
198	</rng:optional>
199	<rng:optional>
200	<rng:attribute name="tau_m">
201	<rng:ref name="float_time_unit"/>
202	</rng:attribute>
203	</rng:optional>
204	<rng:optional>
205	<rng:attribute name="tau_refrac">
206	<rng:ref name="float_time_unit"/>
207	</rng:attribute>
208	</rng:optional>
209	<rng:optional>
210	<rng:attribute name="tau_syn_E">
211	<rng:ref name="float_time_unit"/>
212	</rng:attribute>
213	</rng:optional>
214	<rng:optional>
215	<rng:attribute name="tau_syn_I">
216	<rng:ref name="float_time_unit"/>
217	</rng:attribute>
218	</rng:optional>
219	<rng:optional>
220	<rng:attribute name="e_rev_E">
221	<rng:ref name="float_voltage_unit"/>
222	</rng:attribute>
223	</rng:optional>
224	<rng:optional>
225	<rng:attribute name="e_rev_I">
226	<rng:ref name="float_voltage_unit"/>
227	</rng:attribute>
228	</rng:optional>
229	<rng:optional>
230	<rng:attribute name="v_thresh">
231	<rng:ref name="float_voltage_unit"/>
232	</rng:attribute>
233	</rng:optional>
234	<rng:optional>
235	<rng:attribute name="v_reset">
236	<rng:ref name="float_voltage_unit"/>
237	</rng:attribute>
238	</rng:optional>
239	<rng:optional>
240	<rng:attribute name="i_offset">
241	<rng:ref name="float_current_unit"/>
242	</rng:attribute>
243	</rng:optional>
244	<rng:optional>
245	<rng:attribute name="v_init">
246	<rng:ref name="float_voltage_unit"/>
247	</rng:attribute>
248	</rng:optional>
249	</rng:element>
250	</rng:define>
251
252	<rng:define name="IF_cond_exp">
253	<rng:element name="IF_cond_exp">
254	<a:documentation>
255	default_parameters = {<table><tr><td>
256	'v_rest' </td><td>-65.0, </td><td>Resting membrane potential in mV.</td></tr><tr><td>
257	'cm' </td><td>1.0, </td><td>Capacity of the membrane in nF</td></tr><tr><td>
258	'tau_m' </td><td>20.0, </td><td>Membrane time constant in ms.</td></tr><tr><td>
259	'tau_refrac'</td><td>0.0, </td><td>Duration of refractory period in ms.</td></tr><tr><td>
260	'tau_syn_E' </td><td>5.0, </td><td>Decay time of the excitatory synaptic conductance in ms.</td></tr><tr><td>
261	'tau_syn_I' </td><td>5.0, </td><td>Decay time of the inhibitory synaptic conductance in ms.</td></tr><tr><td>
262	'e_rev_E' </td><td>0.0, </td><td>Reversal potential for excitatory input in mV</td></tr><tr><td>
263	'e_rev_I' </td><td>-70.0, </td><td>Reversal potential for inhibitory input in mV</td></tr><tr><td>
264	'v_thresh' </td><td>-50.0, </td><td>Spike threshold in mV.</td></tr><tr><td>
265	'v_reset' </td><td>-65.0, </td><td>Reset potential after a spike in mV.</td></tr><tr><td>
266	'i_offset' </td><td>0.0, </td><td>Offset current in nA</td></tr><tr><td>
267	'v_init' </td><td>-65.0, </td><td>Membrane potential in mV at t = 0</td></tr></table>
268	}<br/>
269	</a:documentation>
270	<rng:optional>
271	<rng:attribute name="v_rest">
272	<rng:ref name="float_voltage_unit"/>
273	</rng:attribute>
274	</rng:optional>
275	<rng:optional>
276	<rng:attribute name="cm">
277	<rng:ref name="float_capacitance_unit"/>
278	</rng:attribute>
279	</rng:optional>
280	<rng:optional>
281	<rng:attribute name="tau_m">
282	<rng:ref name="float_time_unit"/>
283	</rng:attribute>
284	</rng:optional>
285	<rng:optional>
286	<rng:attribute name="tau_refrac">
287	<rng:ref name="float_time_unit"/>
288	</rng:attribute>
289	</rng:optional>
290	<rng:optional>
291	<rng:attribute name="tau_syn_E">
292	<rng:ref name="float_time_unit"/>
293	</rng:attribute>
294	</rng:optional>
295	<rng:optional>
296	<rng:attribute name="tau_syn_I">
297	<rng:ref name="float_time_unit"/>
298	</rng:attribute>
299	</rng:optional>
300	<rng:optional>
301	<rng:attribute name="e_rev_E">
302	<rng:ref name="float_voltage_unit"/>
303	</rng:attribute>
304	</rng:optional>
305	<rng:optional>
306	<rng:attribute name="e_rev_I">
307	<rng:ref name="float_voltage_unit"/>
308	</rng:attribute>
309	</rng:optional>
310	<rng:optional>
311	<rng:attribute name="v_thresh">
312	<rng:ref name="float_voltage_unit"/>
313	</rng:attribute>
314	</rng:optional>
315	<rng:optional>
316	<rng:attribute name="v_reset">
317	<rng:ref name="float_voltage_unit"/>
318	</rng:attribute>
319	</rng:optional>
320	<rng:optional>
321	<rng:attribute name="i_offset">
322	<rng:ref name="float_current_unit"/>
323	</rng:attribute>
324	</rng:optional>
325	<rng:optional>
326	<rng:attribute name="v_init">
327	<rng:ref name="float_voltage_unit"/>
328	</rng:attribute>
329	</rng:optional>
330	</rng:element>
331	</rng:define>
332
333	<rng:define name="IF_cond_exp_sfa_rr">
334	<rng:element name="IF_cond_exp_sfa_rr">
335	<a:documentation>
336	default_parameters = {<table><tr><td>
337	'v_rest' </td><td>-65.0, </td><td>Resting membrane potential in mV.</td></tr><tr><td>
338	'cm' </td><td>1.0, </td><td>Capacity of the membrane in nF</td></tr><tr><td>
339	'tau_m' </td><td>20.0, </td><td>Membrane time constant in ms.</td></tr><tr><td>
340	'tau_refrac'</td><td>0.0, </td><td>Duration of refractory period in ms.</td></tr><tr><td>
341	'tau_syn_E' </td><td>5.0, </td><td>Decay time of the excitatory synaptic conductance in ms.</td></tr><tr><td>
342	'tau_syn_I' </td><td>5.0, </td><td>Decay time of the inhibitory synaptic conductance in ms.</td></tr><tr><td>
343	'e_rev_E' </td><td>0.0, </td><td>Reversal potential for excitatory input in mV</td></tr><tr><td>
344	'e_rev_I' </td><td>-70.0, </td><td>Reversal potential for inhibitory input in mV</td></tr><tr><td>
345	'v_thresh' </td><td>-50.0, </td><td>Spike threshold in mV.</td></tr><tr><td>
346	'v_reset' </td><td>-65.0, </td><td>Reset potential after a spike in mV.</td></tr><tr><td>
347	'i_offset' </td><td>0.0, </td><td>Offset current in nA</td></tr><tr><td>
348	'v_init' </td><td>-65.0, </td><td>Membrane potential in mV at t = 0</td></tr><tr><td>
349	'tau_sfa' </td><td>100.0, </td><td>Time constant of spike-frequency adaptation in ms</td></tr><tr><td>
350	'e_rev_sfa' </td><td>-75.0, </td><td>spike-frequency adaptation conductance reversal potential in mV</td></tr><tr><td>
351	'q_sfa' </td><td>15.0, </td><td>Quantal spike-frequency adaptation conductance increase in nS</td></tr><tr><td>
352	'tau_rr' </td><td>2.0, </td><td>Time constant of the relative refractory mechanism in ms</td></tr><tr><td>
353	'e_rev_rr' </td><td>-75.0, </td><td>relative refractory mechanism conductance reversal potential in mV</td></tr><tr><td>
354	'q_rr' </td><td>3000.0 </td><td>Quantal relative refractory conductance increase in nS</td></tr></table>
355	}<br/>
356	</a:documentation>
357	<rng:optional>
358	<rng:attribute name="v_rest">
359	<rng:ref name="float_voltage_unit"/>
360	</rng:attribute>
361	</rng:optional>
362	<rng:optional>
363	<rng:attribute name="cm">
364	<rng:ref name="float_capacitance_unit"/>
365	</rng:attribute>
366	</rng:optional>
367	<rng:optional>
368	<rng:attribute name="tau_m">
369	<rng:ref name="float_time_unit"/>
370	</rng:attribute>
371	</rng:optional>
372	<rng:optional>
373	<rng:attribute name="tau_refrac">
374	<rng:ref name="float_time_unit"/>
375	</rng:attribute>
376	</rng:optional>
377	<rng:optional>
378	<rng:attribute name="tau_syn_E">
379	<rng:ref name="float_time_unit"/>
380	</rng:attribute>
381	</rng:optional>
382	<rng:optional>
383	<rng:attribute name="tau_syn_I">
384	<rng:ref name="float_time_unit"/>
385	</rng:attribute>
386	</rng:optional>
387	<rng:optional>
388	<rng:attribute name="e_rev_E">
389	<rng:ref name="float_voltage_unit"/>
390	</rng:attribute>
391	</rng:optional>
392	<rng:optional>
393	<rng:attribute name="e_rev_I">
394	<rng:ref name="float_voltage_unit"/>
395	</rng:attribute>
396	</rng:optional>
397	<rng:optional>
398	<rng:attribute name="v_thresh">
399	<rng:ref name="float_voltage_unit"/>
400	</rng:attribute>
401	</rng:optional>
402	<rng:optional>
403	<rng:attribute name="v_reset">
404	<rng:ref name="float_voltage_unit"/>
405	</rng:attribute>
406	</rng:optional>
407	<rng:optional>
408	<rng:attribute name="i_offset">
409	<rng:ref name="float_current_unit"/>
410	</rng:attribute>
411	</rng:optional>
412	<rng:optional>
413	<rng:attribute name="v_init">
414	<rng:ref name="float_voltage_unit"/>
415	</rng:attribute>
416	</rng:optional>
417	<rng:optional>
418	<rng:attribute name="tau_sfa">
419	<rng:ref name="float_time_unit"/>
420	</rng:attribute>
421	</rng:optional>
422	<rng:optional>
423	<rng:attribute name="e_rev_sfa">
424	<rng:ref name="float_voltage_unit"/>
425	</rng:attribute>
426	</rng:optional>
427	<rng:optional>
428	<rng:attribute name="q_sfa">
429	<rng:ref name="float_conductance_unit"/>
430	</rng:attribute>
431	</rng:optional>
432	<rng:optional>
433	<rng:attribute name="tau_rr">
434	<rng:ref name="float_time_unit"/>
435	</rng:attribute>
436	</rng:optional>
437	<rng:optional>
438	<rng:attribute name="e_rev_rr">
439	<rng:ref name="float_voltage_unit"/>
440	</rng:attribute>
441	</rng:optional>
442	<rng:optional>
443	<rng:attribute name="q_rr">
444	<rng:ref name="float_conductance_unit"/>
445	</rng:attribute>
446	</rng:optional>
447	</rng:element>
448	</rng:define>
449
450	<rng:define name="AdaptiveExponentialIF_alpha">
451	<rng:element name="AdaptiveExponentialIF_alpha">
452	<a:documentation>
453	default_parameters = {<table><tr><td>
454	'v_init' </td><td>-70.6, #'V_m' </td><td>Initial membrane potential in mV</td></tr><tr><td>
455	'w_init' </td><td>0.0, #'w' </td><td>Spike-adaptation current in nA</td></tr><tr><td>
456	'cm' </td><td>0.281, #'C_m' </td><td>Capacity of the membrane in nF</td></tr><tr><td>
457	'tau_refrac' </td><td> 0.0, #'t_ref' </td><td>Duration of refractory period in ms.</td></tr><tr><td>
458	'v_spike' </td><td>0.0, #'V_peak' </td><td>Spike detection threshold in mV.</td></tr><tr><td>
459	'v_reset' </td><td>-70.6, #'V_reset' </td><td>Reset value for V_m after a spike. In mV.</td></tr><tr><td>
460	'v_rest' </td><td>-70.6, #'E_L' </td><td>Resting membrane potential (Leak reversal potential) in mV.</td></tr><tr><td>
461	'tau_m' </td><td>9.3667,#'g_L' </td><td>Membrane time constant in ms (nest:Leak conductance in nS.)</td></tr><tr><td>
462	'i_offset' </td><td>0.0, #'I_e' </td><td>Offset current in nA</td></tr><tr><td>
463	'a' </td><td>4.0, </td><td>Subthreshold adaptation conductance in nS.</td></tr><tr><td>
464	'b' </td><td>0.0805, </td><td>Spike-triggered adaptation in nA</td></tr><tr><td>
465	'delta_T' </td><td>2.0, #Delta_T </td><td>Slope factor in mV</td></tr><tr><td>
466	'tau_w' </td><td>144.0, #'tau_w' </td><td>Adaptation time constant in ms</td></tr><tr><td>
467	'v_thresh' </td><td>-50.4, #'V_t' </td><td>Spike initiation threshold in mV (V_th can also be used for compatibility).</td></tr><tr><td>
468	'e_rev_E' </td><td>0.0, #'E_ex' </td><td>Excitatory reversal potential in mV.</td></tr><tr><td>
469	'tau_syn_E'</td><td>5.0, #'tau_ex' </td><td>Rise time of excitatory synaptic conductance in ms (alpha function).</td></tr><tr><td>
470	'e_rev_I' </td><td>-80.0, #'E_in' </td><td>Inhibitory reversal potential in mV.</td></tr><tr><td>
471	'tau_syn_I'</td><td>5.0, #'tau_in' </td><td>Rise time of the inhibitory synaptic conductance in ms (alpha function).</td></tr></table>
472	}<br/>
473	</a:documentation>
474	<rng:optional>
475	<rng:attribute name="v_init">
476	<rng:ref name="float_voltage_unit"/>
477	</rng:attribute>
478	</rng:optional>
479	<rng:optional>
480	<rng:attribute name="w_init">
481	<rng:ref name="float_current_unit"/>
482	</rng:attribute>
483	</rng:optional>
484	<rng:optional>
485	<rng:attribute name="cm">
486	<rng:ref name="float_capacitance_unit"/>
487	</rng:attribute>
488	</rng:optional>
489	<rng:optional>
490	<rng:attribute name="tau_refrac">
491	<rng:ref name="float_time_unit"/>
492	</rng:attribute>
493	</rng:optional>
494	<rng:optional>
495	<rng:attribute name="v_spike">
496	<rng:ref name="float_voltage_unit"/>
497	</rng:attribute>
498	</rng:optional>
499	<rng:optional>
500	<rng:attribute name="v_rest">
501	<rng:ref name="float_voltage_unit"/>
502	</rng:attribute>
503	</rng:optional>
504	<rng:optional>
505	<rng:attribute name="v_reset">
506	<rng:ref name="float_voltage_unit"/>
507	</rng:attribute>
508	</rng:optional>
509	<rng:optional>
510	<rng:attribute name="tau_m">
511	<rng:ref name="float_time_unit"/>
512	</rng:attribute>
513	</rng:optional>
514	<rng:optional>
515	<rng:attribute name="i_offset">
516	<rng:ref name="float_current_unit"/>
517	</rng:attribute>
518	</rng:optional>
519	<rng:optional>
520	<rng:attribute name="a">
521	<rng:ref name="float_conductance_unit"/>
522	</rng:attribute>
523	</rng:optional>
524	<rng:optional>
525	<rng:attribute name="b">
526	<rng:ref name="float_current_unit"/>
527	</rng:attribute>
528	</rng:optional>
529	<rng:optional>
530	<rng:attribute name="delta_T">
531	<rng:ref name="float_voltage_unit"/>
532	</rng:attribute>
533	</rng:optional>
534	<rng:optional>
535	<rng:attribute name="tau_w">
536	<rng:ref name="float_time_unit"/>
537	</rng:attribute>
538	</rng:optional>
539	<rng:optional>
540	<rng:attribute name="v_thresh">
541	<rng:ref name="float_voltage_unit"/>
542	</rng:attribute>
543	</rng:optional>
544	<rng:optional>
545	<rng:attribute name="e_rev_E">
546	<rng:ref name="float_voltage_unit"/>
547	</rng:attribute>
548	</rng:optional>
549	<rng:optional>
550	<rng:attribute name="tau_syn_E">
551	<rng:ref name="float_time_unit"/>
552	</rng:attribute>
553	</rng:optional>
554	<rng:optional>
555	<rng:attribute name="e_rev_I">
556	<rng:ref name="float_voltage_unit"/>
557	</rng:attribute>
558	</rng:optional>
559	<rng:optional>
560	<rng:attribute name="tau_syn_I">
561	<rng:ref name="float_time_unit"/>
562	</rng:attribute>
563	</rng:optional>
564	</rng:element>
565	</rng:define>
566
567	<rng:define name="SpikeSourcePoisson">
568	<rng:element name="SpikeSourcePoisson">
569	<a:documentation>
570	default_parameters = {<table><tr><td>
571	'rate' </td><td>0.0, </td><td>Mean spike frequency (Hz)</td></tr><tr><td>
572	'start' </td><td>0.0, </td><td>Start time (ms)</td></tr><tr><td>
573	'duration'</td><td>1e6 </td><td>Duration of spike sequence (ms)</td></tr></table>
574	}<br/>
575	</a:documentation>
576	<rng:optional>
577	<rng:attribute name="rate">
578	<rng:ref name="float_frequency_unit"/>
579	</rng:attribute>
580	</rng:optional>
581	<rng:optional>
582	<rng:attribute name="start">
583	<rng:ref name="float_time_unit"/>
584	</rng:attribute>
585	</rng:optional>
586	<rng:optional>
587	<rng:attribute name="duration">
588	<rng:ref name="float_time_unit"/>
589	</rng:attribute>
590	</rng:optional>
591	</rng:element>
592	</rng:define>
593
594	<rng:define name="SpikeSourceInhGamma">
595	<rng:element name="SpikeSourceInhGamma">
596	<a:documentation>
597	default_parameters = {<table><tr><td>
598	'a' </td><td>numpy.array([1.0]),</td><td>time histogram of parameter a of a gamma distribution (dimensionaless)</td></tr><tr><td>
599	'b' </td><td>numpy.array([1.0]),</td><td>time histogram of parameter b of a gamma distribution (seconds)</td></tr><tr><td>
600	'tbins'</td><td>numpy.array([0]), </td><td>time bins of the time histogram of a,b in units of ms</td></tr><tr><td>
601	'rmax'</td><td>1.0, </td><td>Rate (Hz) of the Poisson process to be thinned, usually set to max(1/b)</td></tr><tr><td>
602	'start' </td><td>0.0, </td><td>Start time (ms)</td></tr><tr><td>
603	'duration'</td><td>1e6 </td><td>Duration of spike sequence (ms)</td></tr></table>
604	}<br/>
605	</a:documentation>
606	<rng:attribute name="a">
607	<rng:text/>
608	</rng:attribute>
609	<rng:attribute name="b">
610	<rng:text/>
611	</rng:attribute>
612	<rng:attribute name="tbins">
613	<rng:text/>
614	</rng:attribute>
615	<rng:attribute name="rmax">
616	<rng:ref name="float_frequency_unit"/>
617	</rng:attribute>
618	<rng:attribute name="start">
619	<rng:ref name="float_time_unit"/>
620	</rng:attribute>
621	<rng:attribute name="duration">
622	<rng:ref name="float_time_unit"/>
623	</rng:attribute>
624	</rng:element>
625	</rng:define>
626
627	<rng:define name="SpikeSourceArray">
628	<rng:element name="SpikeSourceArray">
629	<rng:element name="spike_times">
630	<a:documentation>
631	<br/>default_parameters = { 'spike_times' : [] } # list or numpy array containing spike times in milliseconds.<br/>
632	</a:documentation>
633	<rng:text/>
634	</rng:element>
635	</rng:element>
636	</rng:define>
637
638	<rng:define name="NonStandardCellType">
639	<rng:element name="NonStandardCellType">
640	<rng:attribute name="name">
641	<rng:data type="string"/>
642	</rng:attribute>
643	<rng:zeroOrMore>
644	<rng:element name="cellparams">
645	<rng:attribute name="name">
646	<rng:data type="string"/>
647	</rng:attribute>
648	<rng:attribute name="value">
649	<rng:data type="string"/>
650	</rng:attribute>
651	</rng:element>
652	</rng:zeroOrMore>
653	</rng:element>
654	</rng:define>
655
656	</rng:grammar>

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