Index

A

ActionPotentialRemoval (class in mozaik.analysis.analysis) ActivityMovie (class in mozaik.visualization.plotting) add_analysis_result() (mozaik.storage.datastore.DataStore method) (mozaik.storage.datastore.Hdf5DataStore method) add_neuron_annotation() (mozaik.sheets.__init__.Sheet method) add_object() (mozaik.space.InputSpace method) add_recording() (mozaik.storage.datastore.DataStore method) (mozaik.storage.datastore.Hdf5DataStore method) (mozaik.storage.datastore.PickledDataStore method) add_stimulus() (mozaik.storage.datastore.DataStore method) (mozaik.storage.datastore.Hdf5DataStore method) ads_with_equal_stimulus_type() (in module mozaik.storage.queries) Analog_F0andF1 (class in mozaik.analysis.vision)

AnalogSignalList (class in mozaik.analysis.data_structures) AnalogSignalListPlot (class in mozaik.visualization.plotting) analyse() (mozaik.analysis.analysis.Analysis method) Analysis (class in mozaik.analysis.analysis) analysis_result_copy() (mozaik.storage.datastore.DataStoreView method) AnalysisDataStructure (class in mozaik.analysis.data_structures) AnalysisDataStructure1D (class in mozaik.analysis.data_structures) angle_to_pi() (in module mozaik.tools.circ_stat) arborization_function() (mozaik.connectors.fast.DistanceDependentProbabilisticArborization method) (mozaik.connectors.fast.ExponentialProbabilisticArborization method)

B

BaseComponent (class in mozaik.core)

BaseStimulus (class in mozaik.stimuli.__init__)

C

CellWithReceptiveField (class in mozaik.models.vision.spatiotemporalfilter) check_parameters() (mozaik.core.ParametrizedObject method) circ_mean() (in module mozaik.tools.circ_stat) circular_dist() (in module mozaik.tools.circ_stat) clear() (mozaik.space.InputSpace method) colapse() (in module mozaik.tools.mozaik_parametrized) colapse_to_dictionary() (in module mozaik.tools.mozaik_parametrized) CombinationParameterSearch (class in mozaik.meta_workflow.parameter_search) ConductanceSignalList (class in mozaik.analysis.data_structures) ConductanceSignalListPlot (class in mozaik.visualization.plotting)

ConductancesPlot (class in mozaik.visualization.simple_plot) connect() (mozaik.connectors.__init__.Connector method) connection_field_plot_continuous() (mozaik.connectors.__init__.Connector method) ConnectionPlot (class in mozaik.visualization.simple_plot) Connections (class in mozaik.analysis.data_structures) ConnectivityPlot (class in mozaik.visualization.plotting) Connector (class in mozaik.connectors.__init__) ConstantModularConnectorFunction (class in mozaik.connectors.modular_connector_functions) cs_2_vf() (mozaik.sheets.vision.SheetWithMagnificationFactor method) cv_isi() (mozaik.storage.neo_neurotools_wrapper.MozaikSegment method)

D

DataStore (class in mozaik.storage.datastore) DataStoreView (class in mozaik.storage.datastore) delay_function() (mozaik.connectors.fast.DistanceDependentProbabilisticArborization method) (mozaik.connectors.fast.ExponentialProbabilisticArborization method) describe() (mozaik.sheets.__init__.Sheet method) distance_dependent_function() (mozaik.connectors.modular_connector_functions.DistanceDependentModularConnectorFunction method) (mozaik.connectors.modular_connector_functions.ExponentialDecayModularConnectorFunction method) (mozaik.connectors.modular_connector_functions.GaussianDecayModularConnectorFunction method) (mozaik.connectors.modular_connector_functions.HyperbolicModularConnectorFunction method) (mozaik.connectors.modular_connector_functions.LinearModularConnectorFunction method) DistanceDependentModularConnectorFunction (class in mozaik.connectors.modular_connector_functions)

DistanceDependentProbabilisticArborization (class in mozaik.connectors.fast) do_analysis() (mozaik.experiments.__init__.Experiment method) (mozaik.experiments.vision.MeasureDriftingSineGratingWithEyeMovement method) (mozaik.experiments.vision.MeasureNaturalImagesWithEyeMovement method) (mozaik.experiments.vision.MeasureOrientationContrastTuning method) (mozaik.experiments.vision.MeasureOrientationTuningFullfield method) (mozaik.experiments.vision.MeasureSizeTuning method) (mozaik.experiments.vision.MeasureSpontaneousActivity method) (mozaik.experiments.vision.MeasureSpontaneousActivityWithPoissonStimulation method) DriftingGratingWithEyeMovement (class in mozaik.stimuli.vision.topographica_based) DriftingSinusoidalGratingCenterSurroundStimulus (class in mozaik.stimuli.vision.topographica_based) DriftingSinusoidalGratingDisk (class in mozaik.stimuli.vision.topographica_based) dvf_2_dcs() (mozaik.sheets.vision.SheetWithMagnificationFactor method)

E

equal_ads_except() (in module mozaik.storage.queries) equal_ads_type() (in module mozaik.storage.queries) equal_stimulus_type() (in module mozaik.storage.queries) equalParams() (mozaik.tools.mozaik_parametrized.MozaikParametrized method) equalParamsExcept() (mozaik.tools.mozaik_parametrized.MozaikParametrized method) evaluate() (mozaik.connectors.modular_connector_functions.ConstantModularConnectorFunction method) (mozaik.connectors.modular_connector_functions.DistanceDependentModularConnectorFunction method) (mozaik.connectors.modular_connector_functions.ModularConnectorFunction method) (mozaik.connectors.modular_connector_functions.PyNNDistributionConnectorFunction method) (mozaik.connectors.vision.MapDependentModularConnectorFunction method) (mozaik.connectors.vision.V1PushPullArborization method)

execute_job() (mozaik.meta_workflow.parameter_search.LocalSequentialBackend method) (mozaik.meta_workflow.parameter_search.ParameterSearchBackend method) (mozaik.meta_workflow.parameter_search.SlurmSequentialBackend method) Experiment (class in mozaik.experiments.__init__) ExponentialDecayModularConnectorFunction (class in mozaik.connectors.modular_connector_functions) ExponentialProbabilisticArborization (class in mozaik.connectors.fast) export() (mozaik.space.VisualSpace method) (mozaik.stimuli.__init__.BaseStimulus method)

F

F_2d() (in module mozaik.models.vision.cai97) filter_query() (in module mozaik.tools.mozaik_parametrized) find_neuron() (in module mozaik.tools.misc), [1] FixedKConnector (class in mozaik.connectors.fast)

frames() (mozaik.stimuli.__init__.BaseStimulus method) fromDataStoreView() (mozaik.storage.datastore.DataStoreView method) FullfieldDriftingSinusoidalGrating (class in mozaik.stimuli.vision.topographica_based)

G

G() (in module mozaik.models.vision.cai97) gabor() (in module mozaik.connectors.meta_connectors) GaborConnector (class in mozaik.connectors.meta_connectors) GaussianDecayModularConnectorFunction (class in mozaik.connectors.modular_connector_functions) GaussianTuningCurveFit (class in mozaik.analysis.analysis) generate_idd_list_of_neurons() (mozaik.sheets.population_selector.PopulationSelector method) (mozaik.sheets.population_selector.RCAll method) (mozaik.sheets.population_selector.RCGrid method) (mozaik.sheets.population_selector.RCRandomN method) (mozaik.sheets.population_selector.RCRandomPercentage method) generate_parameter_combinations() (mozaik.meta_workflow.parameter_search.CombinationParameterSearch method) (mozaik.meta_workflow.parameter_search.ParameterSearch method) get_analysis_result() (mozaik.storage.datastore.DataStoreView method) get_asl_by_id() (mozaik.analysis.data_structures.AnalogSignalList method) get_cache() (mozaik.models.vision.spatiotemporalfilter.SpatioTemporalFilterRetinaLGN method) get_data() (mozaik.sheets.__init__.Sheet method) get_duration() (mozaik.space.InputSpace method) get_econ_by_id() (mozaik.analysis.data_structures.ConductanceSignalList method) get_esyn() (mozaik.storage.neo_neurotools_wrapper.MozaikSegment method) get_icon_by_id() (mozaik.analysis.data_structures.ConductanceSignalList method) get_isyn() (mozaik.storage.neo_neurotools_wrapper.MozaikSegment method) get_max_luminance() (mozaik.space.VisualSpace method) get_maximum_duration() (mozaik.space.InputSpace method) get_neuron_annotation() (mozaik.sheets.__init__.Sheet method) get_neuron_annotations() (mozaik.sheets.__init__.Sheet method) (mozaik.storage.datastore.DataStoreView method) get_neuron_postions() (mozaik.storage.datastore.DataStoreView method)

get_seeds() (in module mozaik.__init__) get_segments() (mozaik.storage.datastore.DataStoreView method) get_sensory_stimulus() (mozaik.storage.datastore.DataStoreView method) get_sheet_ids() (mozaik.storage.datastore.DataStoreView method) get_sheet_indexes() (mozaik.storage.datastore.DataStoreView method) get_spiketrain() (mozaik.storage.neo_neurotools_wrapper.MozaikSegment method) get_spiketrains() (mozaik.storage.neo_neurotools_wrapper.MozaikSegment method) get_stimuli() (mozaik.storage.datastore.DataStoreView method) get_stored_esyn_ids() (mozaik.storage.neo_neurotools_wrapper.MozaikSegment method) get_stored_isyn_ids() (mozaik.storage.neo_neurotools_wrapper.MozaikSegment method) get_stored_spike_train_ids() (mozaik.storage.neo_neurotools_wrapper.MozaikSegment method) get_stored_vm_ids() (mozaik.storage.neo_neurotools_wrapper.MozaikSegment method) get_value_by_id() (mozaik.analysis.data_structures.PerNeuronValue method) get_value_by_ids() (mozaik.analysis.data_structures.PerNeuronPairValue method) get_vm() (mozaik.storage.neo_neurotools_wrapper.MozaikSegment method) getMozaikLogger() (in module mozaik.__init__) Global (class in mozaik.controller) GridPlot (class in mozaik.visualization.plot_constructors) GSTA (class in mozaik.analysis.analysis) GSynPlot (class in mozaik.visualization.plotting)

H

Hdf5DataStore (class in mozaik.storage.datastore)

HyperbolicModularConnectorFunction (class in mozaik.connectors.modular_connector_functions)

I

idd() (mozaik.tools.mozaik_parametrized.MozaikParametrized class method) identical_parametrized_object_params() (in module mozaik.tools.mozaik_parametrized) identify_unpresented_stimuli() (mozaik.storage.datastore.DataStore method) init_synaptic_mechanisms() (mozaik.connectors.__init__.Connector method) initialize() (mozaik.models.vision.spatiotemporalfilter.CellWithReceptiveField method)

InputSpace (class in mozaik.space) InternalStimulus (class in mozaik.stimuli.__init__) intersection() (mozaik.space.VisualRegion method) Irregularity (class in mozaik.analysis.analysis) isi() (mozaik.storage.neo_neurotools_wrapper.MozaikSegment method)

K

kernel_duration (mozaik.models.vision.spatiotemporalfilter.SpatioTemporalReceptiveField attribute)

L

LinearModularConnectorFunction (class in mozaik.connectors.modular_connector_functions) LinePlot (class in mozaik.visualization.plot_constructors) load() (mozaik.storage.datastore.DataStore method) (mozaik.storage.datastore.Hdf5DataStore method) (mozaik.storage.datastore.PickledDataStore method) load_component() (in module mozaik.__init__)

load_full() (mozaik.storage.neo_neurotools_wrapper.MozaikSegment method) (mozaik.storage.neo_neurotools_wrapper.PickledDataStoreNeoWrapper method) load_parameters() (in module mozaik.tools.distribution_parametrization) LocalHomogeneityIndex (class in mozaik.analysis.vision) LocalSequentialBackend (class in mozaik.meta_workflow.parameter_search)

M

make_line_plot() (mozaik.visualization.plot_constructors.LinePlot method) MapDependentModularConnectorFunction (class in mozaik.connectors.vision) master_directory_name() (mozaik.meta_workflow.parameter_search.CombinationParameterSearch method) (mozaik.meta_workflow.parameter_search.ParameterSearch method) matching_parametrized_object_params() (in module mozaik.tools.mozaik_parametrized) mean_rates() (mozaik.storage.neo_neurotools_wrapper.MozaikSegment method) MeasureDriftingSineGratingWithEyeMovement (class in mozaik.experiments.vision) MeasureNaturalImagesWithEyeMovement (class in mozaik.experiments.vision) MeasureOrientationContrastTuning (class in mozaik.experiments.vision) MeasureOrientationTuningFullfield (class in mozaik.experiments.vision) MeasureSizeTuning (class in mozaik.experiments.vision) MeasureSpontaneousActivity (class in mozaik.experiments.vision) MeasureSpontaneousActivityWithPoissonStimulation (class in mozaik.experiments.vision) meshgrid3D() (in module mozaik.models.vision.cai97) (in module mozaik.models.vision.spatiotemporalfilter) Model (class in mozaik.models.__init__) ModularConnector (class in mozaik.connectors.modular) ModularConnectorFunction (class in mozaik.connectors.modular_connector_functions) ModularSamplingProbabilisticConnector (class in mozaik.connectors.modular) ModularSingleWeightProbabilisticConnector (class in mozaik.connectors.modular) ModulationRatio (class in mozaik.analysis.vision) mozaik (module) mozaik.__init__ (module) mozaik.analysis.analysis (module) mozaik.analysis.data_structures (module) mozaik.analysis.helper_functions (module) mozaik.analysis.technical (module) mozaik.analysis.vision (module) mozaik.connectors.__init__ (module) mozaik.connectors.fast (module) mozaik.connectors.meta_connectors (module) mozaik.connectors.modular (module) mozaik.connectors.modular_connector_functions (module)

mozaik.connectors.vision (module) mozaik.controller (module) mozaik.core (module) mozaik.experiments.__init__ (module) mozaik.experiments.vision (module) mozaik.meta_workflow.parameter_search (module) mozaik.models.__init__ (module) mozaik.models.vision.cai97 (module) mozaik.models.vision.spatiotemporalfilter (module) mozaik.sheets.__init__ (module) mozaik.sheets.population_selector (module) mozaik.sheets.vision (module) mozaik.space (module) mozaik.stimuli.__init__ (module) mozaik.stimuli.vision.topographica_based (module) mozaik.stimuli.vision.visual_stimulus (module) mozaik.storage.datastore (module) mozaik.storage.neo_neurotools_wrapper (module) mozaik.storage.queries (module) mozaik.tools.circ_stat (module) mozaik.tools.distribution_parametrization (module) mozaik.tools.misc (module), [1] mozaik.tools.mozaik_parametrized (module) mozaik.tools.neo_object_operations (module) mozaik.tools.units (module) mozaik.visualization.plot_constructors (module) mozaik.visualization.plotting (module) mozaik.visualization.simple_plot (module) MozaikExtendedParameterSet (class in mozaik.tools.distribution_parametrization) MozaikParametrized (class in mozaik.tools.mozaik_parametrized) MozaikSegment (class in mozaik.storage.neo_neurotools_wrapper)

N

name (mozaik.tools.mozaik_parametrized.MozaikParametrized attribute) NaturalImageWithEyeMovement (class in mozaik.stimuli.vision.topographica_based) neo_mean() (in module mozaik.tools.neo_object_operations) neo_sum() (in module mozaik.tools.neo_object_operations) neuron_annotations() (mozaik.models.__init__.Model method) neuron_ids() (mozaik.models.__init__.Model method) neuron_num() (mozaik.storage.neo_neurotools_wrapper.MozaikSegment method) neuron_positions() (mozaik.models.__init__.Model method)

NeuronAnnotationsToPerNeuronValues (class in mozaik.analysis.technical) NeuronToNeuronAnalogSignalCorrelations (class in mozaik.analysis.analysis) next_frame() (mozaik.stimuli.vision.visual_stimulus.VisualStimulus method) normal_function() (in module mozaik.tools.misc), [1] NoStimulation (class in mozaik.experiments.__init__) Null (class in mozaik.stimuli.vision.topographica_based) number_of_parameters() (mozaik.stimuli.__init__.BaseStimulus method)

O

overlaps() (mozaik.space.VisualRegion method)

OverviewPlot (class in mozaik.visualization.plotting)

P

param_filter_query() (in module mozaik.storage.queries) parameter_combinations() (in module mozaik.meta_workflow.parameter_search) parameter_value_list() (in module mozaik.tools.mozaik_parametrized) ParameterSearch (class in mozaik.meta_workflow.parameter_search) ParameterSearchBackend (class in mozaik.meta_workflow.parameter_search) ParametrizedObject (class in mozaik.core) ParamFilterQuery (class in mozaik.storage.queries) params() (mozaik.tools.mozaik_parametrized.MozaikParametrized class method) partition_analysis_results_by_parameters_query() (in module mozaik.storage.queries) partition_analysis_results_by_stimulus_parameters_query() (in module mozaik.storage.queries) partition_by_stimulus_paramter_query() (in module mozaik.storage.queries) PartitionAnalysisResultsByParameterNameQuery (class in mozaik.storage.queries) PartitionAnalysisResultsByStimulusParameterNameQuery (class in mozaik.storage.queries) PartitionByStimulusParamterQuery (class in mozaik.storage.queries) PerDSVPlot (class in mozaik.visualization.plot_constructors) perform_analysis() (mozaik.analysis.analysis.ActionPotentialRemoval method) (mozaik.analysis.analysis.Analysis method) (mozaik.analysis.analysis.GSTA method) (mozaik.analysis.analysis.GaussianTuningCurveFit method) (mozaik.analysis.analysis.Irregularity method) (mozaik.analysis.analysis.NeuronToNeuronAnalogSignalCorrelations method) (mozaik.analysis.analysis.PSTH method) (mozaik.analysis.analysis.PeriodicTuningCurvePreferenceAndSelectivity_VectorAverage method) (mozaik.analysis.analysis.PopulationMean method) (mozaik.analysis.analysis.Precision method) (mozaik.analysis.analysis.TemporalBinAverage method) (mozaik.analysis.analysis.TrialAveragedFiringRate method) (mozaik.analysis.analysis.TrialVariability method) (mozaik.analysis.technical.NeuronAnnotationsToPerNeuronValues method) (mozaik.analysis.vision.Analog_F0andF1 method) (mozaik.analysis.vision.LocalHomogeneityIndex method) (mozaik.analysis.vision.ModulationRatio method) periodic() (in module mozaik.tools.units) PeriodicTuningCurvePreferenceAndSelectivity_VectorAverage (class in mozaik.analysis.analysis) PerNeuronPairValue (class in mozaik.analysis.data_structures) PerNeuronValue (class in mozaik.analysis.data_structures) PerNeuronValuePlot (class in mozaik.visualization.plotting) PerNeuronValueScatterPlot (class in mozaik.visualization.plotting) PerStimulusADSPlot (class in mozaik.visualization.plot_constructors) PerStimulusPlot (class in mozaik.visualization.plot_constructors) PickledDataStore (class in mozaik.storage.datastore)

PickledDataStoreNeoWrapper (class in mozaik.storage.neo_neurotools_wrapper) PixelMovie (class in mozaik.visualization.simple_plot) plot() (mozaik.visualization.plotting.Plotting method) (mozaik.visualization.simple_plot.SimplePlot method) plot_next_frame() (mozaik.visualization.simple_plot.StandardStyleAnimatedPlot method) Plotting (class in mozaik.visualization.plotting) PlotTuningCurve (class in mozaik.visualization.plotting) PoissonNetworkKick (class in mozaik.experiments.__init__) pop (mozaik.sheets.__init__.Sheet attribute) PopulationMean (class in mozaik.analysis.analysis) PopulationSelector (class in mozaik.sheets.population_selector) post_plot() (mozaik.visualization.simple_plot.SimplePlot method) pre_axis_plot() (mozaik.visualization.simple_plot.SimplePlot method) pre_plot() (mozaik.visualization.simple_plot.SimplePlot method) Precision (class in mozaik.analysis.analysis) prepare_artificial_stimulation() (mozaik.sheets.__init__.Sheet method) present_stimulus_and_record() (mozaik.models.__init__.Model method) print_content() (mozaik.storage.datastore.DataStoreView method) process_input() (mozaik.core.SensoryInputComponent method) (mozaik.models.vision.spatiotemporalfilter.SpatioTemporalFilterRetinaLGN method) provide_null_input() (mozaik.core.SensoryInputComponent method) (mozaik.models.vision.spatiotemporalfilter.SpatioTemporalFilterRetinaLGN method) PSTH (class in mozaik.analysis.analysis) psth() (in module mozaik.analysis.helper_functions) psth_across_trials() (in module mozaik.analysis.helper_functions) PyNNDistribution (class in mozaik.tools.distribution_parametrization) PyNNDistributionConnectorFunction (class in mozaik.connectors.modular_connector_functions)

Q

quantize() (mozaik.models.vision.spatiotemporalfilter.SpatioTemporalReceptiveField method) Query (class in mozaik.storage.queries)

query() (mozaik.storage.queries.ParamFilterQuery method) (mozaik.storage.queries.PartitionAnalysisResultsByParameterNameQuery method) (mozaik.storage.queries.PartitionAnalysisResultsByStimulusParameterNameQuery method) (mozaik.storage.queries.PartitionByStimulusParamterQuery method) (mozaik.storage.queries.Query method) (mozaik.storage.queries.TagBasedQuery method)

R

rad_to_complex() (in module mozaik.tools.circ_stat) RasterPlot (class in mozaik.visualization.plotting) RCAll (class in mozaik.sheets.population_selector) RCGrid (class in mozaik.sheets.population_selector) RCRandomN (class in mozaik.sheets.population_selector) RCRandomPercentage (class in mozaik.sheets.population_selector) read_from_str() (mozaik.tools.distribution_parametrization.MozaikExtendedParameterSet static method) record() (mozaik.sheets.__init__.Sheet method) recordings_copy() (mozaik.storage.datastore.DataStoreView method) register_connector() (mozaik.models.__init__.Model method) register_sheet() (mozaik.models.__init__.Model method)

release() (mozaik.storage.neo_neurotools_wrapper.PickledDataStoreNeoWrapper method) required_parameters (mozaik.analysis.analysis.ActionPotentialRemoval attribute) (mozaik.analysis.analysis.GSTA attribute) (mozaik.analysis.analysis.GaussianTuningCurveFit attribute) (mozaik.analysis.analysis.NeuronToNeuronAnalogSignalCorrelations attribute) (mozaik.analysis.analysis.PSTH attribute) (mozaik.analysis.analysis.PeriodicTuningCurvePreferenceAndSelectivity_VectorAverage attribute) (mozaik.analysis.analysis.Precision attribute) (mozaik.analysis.analysis.TemporalBinAverage attribute) (mozaik.analysis.analysis.TrialVariability attribute) (mozaik.analysis.vision.LocalHomogeneityIndex attribute) (mozaik.connectors.__init__.Connector attribute) (mozaik.connectors.__init__.SpecificArborization attribute) (mozaik.connectors.__init__.SpecificProbabilisticArborization attribute) (mozaik.connectors.fast.DistanceDependentProbabilisticArborization attribute) (mozaik.connectors.fast.ExponentialProbabilisticArborization attribute) (mozaik.connectors.fast.FixedKConnector attribute) (mozaik.connectors.fast.UniformProbabilisticArborization attribute) (mozaik.connectors.meta_connectors.GaborConnector attribute) (mozaik.connectors.modular.ModularConnector attribute) (mozaik.connectors.modular.ModularSamplingProbabilisticConnector attribute) (mozaik.connectors.modular.ModularSingleWeightProbabilisticConnector attribute) (mozaik.connectors.modular_connector_functions.ExponentialDecayModularConnectorFunction attribute) (mozaik.connectors.modular_connector_functions.GaussianDecayModularConnectorFunction attribute) (mozaik.connectors.modular_connector_functions.HyperbolicModularConnectorFunction attribute) (mozaik.connectors.modular_connector_functions.LinearModularConnectorFunction attribute) (mozaik.connectors.modular_connector_functions.PyNNDistributionConnectorFunction attribute) (mozaik.connectors.vision.MapDependentModularConnectorFunction attribute) (mozaik.connectors.vision.V1PushPullArborization attribute) (mozaik.core.ParametrizedObject attribute) (mozaik.models.__init__.Model attribute) (mozaik.models.vision.spatiotemporalfilter.SpatioTemporalFilterRetinaLGN attribute) (mozaik.sheets.__init__.Sheet attribute) (mozaik.sheets.population_selector.RCGrid attribute) (mozaik.sheets.population_selector.RCRandomN attribute) (mozaik.sheets.population_selector.RCRandomPercentage attribute) (mozaik.sheets.vision.RetinalUniformSheet attribute) (mozaik.sheets.vision.SheetWithMagnificationFactor attribute) (mozaik.sheets.vision.VisualCorticalUniformSheet attribute) (mozaik.storage.datastore.DataStore attribute) (mozaik.storage.queries.ParamFilterQuery attribute) (mozaik.storage.queries.PartitionAnalysisResultsByParameterNameQuery attribute) (mozaik.storage.queries.PartitionAnalysisResultsByStimulusParameterNameQuery attribute) (mozaik.storage.queries.PartitionByStimulusParamterQuery attribute) (mozaik.storage.queries.Query attribute) (mozaik.storage.queries.TagBasedQuery attribute) reset() (mozaik.models.__init__.Model method) (mozaik.space.InputSpace method) (mozaik.stimuli.__init__.BaseStimulus method) (mozaik.stimuli.vision.visual_stimulus.VisualStimulus method) response_current() (mozaik.models.vision.spatiotemporalfilter.CellWithReceptiveField method) RetinalInputMovie (class in mozaik.visualization.plotting) RetinalUniformSheet (class in mozaik.sheets.vision) return_stimuli() (mozaik.experiments.__init__.Experiment method) run() (mozaik.experiments.__init__.Experiment method) (mozaik.models.__init__.Model method) run_experiments() (in module mozaik.controller) run_parameter_search() (mozaik.meta_workflow.parameter_search.ParameterSearch method) run_workflow() (in module mozaik.controller)

S

sample_from_bin_distribution() (in module mozaik.tools.misc), [1] save() (mozaik.storage.datastore.DataStore method) (mozaik.storage.datastore.Hdf5DataStore method) (mozaik.storage.datastore.PickledDataStore method) ScatterPlot (class in mozaik.visualization.simple_plot) ScatterPlotMovie (class in mozaik.visualization.simple_plot) sensory_stimulus_copy() (mozaik.storage.datastore.DataStoreView method) SensoryInputComponent (class in mozaik.core) set_duration() (mozaik.space.InputSpace method) set_neuron_annotations() (mozaik.storage.datastore.DataStore method) set_neuron_ids() (mozaik.storage.datastore.DataStore method) set_neuron_positions() (mozaik.storage.datastore.DataStore method) set_spiketrains() (mozaik.storage.neo_neurotools_wrapper.MozaikSegment method) setup_artificial_stimulation() (mozaik.sheets.__init__.Sheet method) setup_initial_values() (mozaik.sheets.__init__.Sheet method) setup_logging() (in module mozaik.controller) setup_mpi() (in module mozaik.__init__) setup_to_record_list() (mozaik.sheets.__init__.Sheet method) Sheet (class in mozaik.sheets.__init__) sheets() (mozaik.storage.datastore.DataStoreView method) SheetWithMagnificationFactor (class in mozaik.sheets.vision) SimplePlot (class in mozaik.visualization.simple_plot)

SingleValue (class in mozaik.analysis.data_structures) SInteger (in module mozaik.tools.mozaik_parametrized) size_in_degrees() (mozaik.sheets.__init__.Sheet method) (mozaik.sheets.vision.RetinalUniformSheet method) (mozaik.sheets.vision.SheetWithMagnificationFactor method) SlurmSequentialBackend (class in mozaik.meta_workflow.parameter_search) SNumber (in module mozaik.tools.mozaik_parametrized) SpatioTemporalFilterRetinaLGN (class in mozaik.models.vision.spatiotemporalfilter) SpatioTemporalReceptiveField (class in mozaik.models.vision.spatiotemporalfilter) SpecificArborization (class in mozaik.connectors.__init__) SpecificProbabilisticArborization (class in mozaik.connectors.__init__) SpikeHistogramPlot (class in mozaik.visualization.simple_plot) SpikeRasterPlot (class in mozaik.visualization.simple_plot) spiketrains (mozaik.storage.neo_neurotools_wrapper.MozaikSegment attribute) SString (in module mozaik.tools.mozaik_parametrized) StandardStyleAnimatedPlot (class in mozaik.visualization.simple_plot) StandardStyleLinePlot (class in mozaik.visualization.simple_plot) store_connections() (mozaik.connectors.__init__.Connector method) stRF_2d() (in module mozaik.models.vision.cai97) stRF_kernel_2d() (in module mozaik.models.vision.cai97) subplot() (mozaik.visualization.plotting.Plotting method)

T

tag_based_query() (in module mozaik.storage.queries) TagBasedQuery (class in mozaik.storage.queries) TemporalBinAverage (class in mozaik.analysis.analysis) time_points() (mozaik.space.InputSpace method)

TopographicaBasedVisualStimulus (class in mozaik.stimuli.vision.topographica_based) TrialAveragedFiringRate (class in mozaik.analysis.analysis) TrialVariability (class in mozaik.analysis.analysis)

U

UniformProbabilisticArborization (class in mozaik.connectors.fast) update() (mozaik.space.InputSpace method) (mozaik.stimuli.__init__.BaseStimulus method) (mozaik.stimuli.vision.visual_stimulus.VisualStimulus method)

update_params() (mozaik.visualization.simple_plot.SimplePlot method)

V

V1PushPullArborization (class in mozaik.connectors.vision) varying_parameters() (in module mozaik.tools.mozaik_parametrized) version (mozaik.core.ParametrizedObject attribute) vf_2_cs() (mozaik.sheets.vision.SheetWithMagnificationFactor method) view() (mozaik.models.vision.spatiotemporalfilter.CellWithReceptiveField method) (mozaik.space.VisualSpace method) VisualCorticalUniformSheet (class in mozaik.sheets.vision)

VisualExperiment (class in mozaik.experiments.vision) VisualRegion (class in mozaik.space) VisualSpace (class in mozaik.space) VisualStimulus (class in mozaik.stimuli.vision.visual_stimulus) VmPlot (class in mozaik.visualization.plotting)

W

write_cache() (mozaik.models.vision.spatiotemporalfilter.SpatioTemporalFilterRetinaLGN method)