Index

_

__add__() (Assembly method) (Population method) (PopulationView method) __div__() (Sequence method) __getitem__() (Assembly method) (LazyArray method) (ParameterSpace method) (Population method) (PopulationView method) (Projection method)

__iadd__() (Assembly method) __iter__() (Assembly method) (ParameterSpace method) (Population method) (PopulationView method) (Projection method) __len__() (Assembly method) (Population method) (PopulationView method) (Projection method) __mul__() (Sequence method)

A

ACSource (class in pyNN.neuron.standardmodels.electrodes) AdditivePotentiationMultiplicativeDepression (class in pyNN.standardmodels.synapses) AdditiveWeightDependence (class in pyNN.standardmodels.synapses) AdExp (class in pyNN.standardmodels.cells) all() (Assembly method) (Population method) (PopulationView method) all_cells (Assembly property) (Population attribute) (PopulationView attribute)

AllToAllConnector (class in pyNN.connectors) annotate() (Population method) (PopulationView method) (Projection method) apply() (LazyArray method) ArrayConnector (class in pyNN.connectors) as_dict() (ParameterSpace method) Assembly (class in pyNN.neuron) AXES (Space attribute)

B

BaseStructure (class in pyNN.space)

by_column() (LazyArray method)

C

calculate_size() (Grid2D method) (Grid3D method) can_record() (Population method) (PopulationView method) celltype (Population attribute) (PopulationView attribute) check_bounds() (LazyArray method) CloneConnector (class in pyNN.connectors) columns() (ParameterSpace method) comparison_plot() (in module pyNN.utility.plotting) computed_parameters() (PointNeuron method) (StandardCellType method) (StandardSynapseType method) computed_parameters_include() (PointNeuron method) (StandardSynapseType method) CondAlphaPostSynapticResponse (class in pyNN.standardmodels.receptors) CondBetaPostSynapticResponse (class in pyNN.standardmodels.receptors) CondExpPostSynapticResponse (class in pyNN.standardmodels.receptors) conductance_based (Assembly property) (CondAlphaPostSynapticResponse attribute) (CondBetaPostSynapticResponse attribute) (CondExpPostSynapticResponse attribute) (CurrExpPostSynapticResponse attribute) (EIF_cond_alpha_isfa_ista attribute) (EIF_cond_exp_isfa_ista attribute) (IF_cond_alpha attribute) (IF_cond_exp attribute) (IF_cond_exp_gsfa_grr attribute) (IF_curr_alpha attribute), [1] (IF_curr_exp attribute), [1] (Izhikevich attribute), [1] (PointNeuron attribute) (PointNeuron property) (Population property) (PopulationView property) (SpikeSourceArray attribute) (SpikeSourceInhGamma attribute) (SpikeSourcePoisson attribute)

connect() (Connector method) (in module pyNN.neuron) connection_type (StandardSynapseType attribute) connections (Projection property) Connector (class in pyNN.connectors) create() (in module pyNN.neuron) CSAConnector (class in pyNN.connectors) Cuboid (class in pyNN.space) CurrExpPostSynapticResponse (class in pyNN.standardmodels.receptors)

D

DCSource (class in pyNN.neuron.standardmodels.electrodes) default_initial_values (AdExp attribute) (CondAlphaPostSynapticResponse attribute) (CondBetaPostSynapticResponse attribute) (CondExpPostSynapticResponse attribute) (CurrExpPostSynapticResponse attribute) (EIF_cond_alpha_isfa_ista attribute) (EIF_cond_exp_isfa_ista attribute) (IF_cond_alpha attribute) (IF_cond_exp attribute) (IF_cond_exp_gsfa_grr attribute) (IF_curr_alpha attribute) (IF_curr_exp attribute) (Izhikevich attribute) (LIF attribute) (PointNeuron property) (StandardSynapseType attribute) (TsodyksMarkramSynapse attribute) default_parameters (AdditivePotentiationMultiplicativeDepression attribute) (AdditiveWeightDependence attribute) (AdExp attribute) (CondAlphaPostSynapticResponse attribute) (CondBetaPostSynapticResponse attribute) (CondExpPostSynapticResponse attribute) (CurrExpPostSynapticResponse attribute) (EIF_cond_alpha_isfa_ista attribute) (EIF_cond_exp_isfa_ista attribute) (GutigWeightDependence attribute) (IF_cond_alpha attribute) (IF_cond_exp attribute) (IF_cond_exp_gsfa_grr attribute) (IF_curr_alpha attribute) (IF_curr_exp attribute) (Izhikevich attribute) (LIF attribute) (MultiplicativeWeightDependence attribute) (SpikePairRule attribute) (SpikeSourceArray attribute) (SpikeSourceInhGamma attribute) (SpikeSourcePoisson attribute) (StandardSynapseType attribute) (StaticSynapse attribute) (TsodyksMarkramSynapse attribute)

describe() (Assembly method) (BaseStructure method) (Connector method) (GSLRNG method) (NumpyRNG method) (Population method) (PopulationView method) (Projection method) (SpikePairRule method) (StandardCellType method) (StandardSynapseType method) (STDPMechanism method) (STDPWeightDependence method) diff() (Timer method) DisplacementDependentProbabilityConnector (class in pyNN.connectors) distance_generator() (Space method) DistanceDependentProbabilityConnector (class in pyNN.connectors) distances() (Space method)

E

EIF_cond_alpha_isfa_ista (class in pyNN.standardmodels.cells) EIF_cond_exp_isfa_ista (class in pyNN.standardmodels.cells) elapsed_time() (Timer method) elapsedTime() (Timer method) end() (in module pyNN.neuron)

environment variable PYTHONPATH, [1] evaluate() (LazyArray method) (ParameterSpace method) expand() (ParameterSpace method) extra_parameters (StandardSynapseType attribute)

F

Figure (class in pyNN.utility.plotting) find_units() (Assembly method) (Population method) (PopulationView method) first_id (Assembly property) FixedNumberPostConnector (class in pyNN.connectors)

FixedNumberPreConnector (class in pyNN.connectors) FixedProbabilityConnector (class in pyNN.connectors) FixedTotalNumberConnector (class in pyNN.connectors) flatten() (ParameterSpace method) FromFileConnector (class in pyNN.connectors) FromListConnector (class in pyNN.connectors)

G

gamma() (GSLRNG method) generate_positions() (BaseStructure method) (Grid2D method) (Grid3D method) (Line method) (RandomStructure method) get() (Assembly method) (Population method) (PopulationView method) (Projection method) get_annotations() (Assembly method) get_current_time() (in module pyNN.neuron) get_data() (Assembly method) (Population method) (PopulationView method) get_gsyn() (Assembly method) (Population method) (PopulationView method) get_max_delay() (in module pyNN.neuron) get_min_delay() (in module pyNN.neuron) get_native_names() (StandardCellType method) (StandardSynapseType method) get_parameter_names() (StandardCellType class method) (StandardSynapseType class method) (STDPMechanism method) get_parameters() (ACSource method) (BaseStructure method) (Connector method) (DCSource method) (NoisyCurrentSource method) (StepCurrentSource method)

get_population() (Assembly method) get_schema() (StandardCellType method) (StandardSynapseType method) (STDPMechanism method) get_simulator() (in module pyNN.utility) get_spike_counts() (Assembly method) (Population method) (PopulationView method) get_time_step() (in module pyNN.neuron) get_v() (Assembly method) (Population method) (PopulationView method) getDelays() (Projection method) getSpikes() (Assembly method) (Population method) (PopulationView method) getSynapseDynamics() (Projection method) getWeights() (Projection method) grandparent (PopulationView property) Grid2D (class in pyNN.space) Grid3D (class in pyNN.space) GSLRNG (class in pyNN.random) GutigWeightDependence (class in pyNN.standardmodels.synapses)

H

has_native_rngs (ParameterSpace property) has_parameter() (StandardCellType class method) (StandardSynapseType class method) (STDPMechanism method)

has_presynaptic_components (StandardSynapseType attribute)

I

id_to_index() (Assembly method) (Population method) (PopulationView method) id_to_local_index() (Population method) IF_cond_alpha (class in pyNN.standardmodels.cells) IF_cond_exp (class in pyNN.standardmodels.cells) IF_cond_exp_gsfa_grr (class in pyNN.standardmodels.cells) IF_curr_alpha (class in pyNN.standardmodels.cells) IF_curr_exp (class in pyNN.standardmodels.cells) index_from_parent_index() (PopulationView method) index_in_grandparent() (PopulationView method) IndexBasedProbabilityConnector (class in pyNN.connectors) init_logging() (in module pyNN.utility) initial_values (Population attribute) (PopulationView attribute) (PopulationView property) initialize() (Assembly method) (in module pyNN.neuron) (Population method) (PopulationView method) (Projection method) inject() (Assembly method) (Population method) (PopulationView method) inject_into() (ACSource method) (DCSource method) (NoisyCurrentSource method) (StepCurrentSource method)

injectable (AdExp attribute) (Assembly property) (EIF_cond_alpha_isfa_ista attribute) (EIF_cond_exp_isfa_ista attribute) (IF_cond_alpha attribute) (IF_cond_exp attribute) (IF_cond_exp_gsfa_grr attribute) (IF_curr_alpha attribute) (IF_curr_exp attribute) (Izhikevich attribute) (LIF attribute) (PointNeuron attribute) (Population property) (PopulationView property) (SpikeSourceArray attribute), [1] (SpikeSourceInhGamma attribute), [1] (SpikeSourcePoisson attribute), [1] is_homogeneous (LazyArray property) (ParameterSpace property) is_local() (Population method) (PopulationView method) items() (ParameterSpace method) Izhikevich (class in pyNN.standardmodels.cells)

K

keys() (ParameterSpace method)

L

label (Population attribute) (PopulationView attribute) (Projection attribute) last_id (Assembly property) lazily_evaluate() (RandomDistribution method) LazyArray (class in pyNN.parameters) LIF (class in pyNN.standardmodels.cells)

Line (class in pyNN.space) list_standard_models() (in module pyNN.neuron) load_population() (in module pyNN.utility) local_cells (Assembly property) (Population property) (PopulationView attribute) local_size (Population property) (PopulationView property)

M

mark() (Timer method) mask (PopulationView attribute) mean_spike_count() (Assembly method) (Population method) (PopulationView method) meanSpikeCount() (Population method) (PopulationView method)

model (STDPMechanism property) module pyNN.connectors pyNN.parameters pyNN.random pyNN.space MULTI_SYNAPSE_OPERATIONS (Projection attribute) MultiplicativeWeightDependence (class in pyNN.standardmodels.synapses)

N

native_parameters (StandardSynapseType property) (STDPMechanism property) NativeRNG (class in pyNN.random) ncols (LazyArray property) nearest() (Population method) (PopulationView method) next() (GSLRNG method) (NativeRNG method) (NumpyRNG method) (RandomDistribution method)

NoisyCurrentSource (class in pyNN.neuron.standardmodels.electrodes) normal() (GSLRNG method) normal_clipped() (GSLRNG method) (NumpyRNG method) normal_clipped_to_boundary() (NumpyRNG method) notify() (in module pyNN.utility) nrows (LazyArray property) num_processes() (in module pyNN.neuron) NumpyRNG (class in pyNN.random)

O

OneToOneConnector (class in pyNN.connectors)

P

Panel (class in pyNN.utility.plotting) parallel_safe (ParameterSpace property) parameter_checks (StandardSynapseType attribute) parameter_names (Grid2D attribute) (Grid3D attribute) (Line attribute) (RandomStructure attribute) parameter_space (STDPMechanism property) ParameterSpace (class in pyNN.parameters) parent (PopulationView attribute) plot() (Panel method) PointNeuron (class in pyNN.standardmodels.cells) pop() (ParameterSpace method) Population (class in pyNN.neuron) PopulationView (class in pyNN.neuron) position_generator (Assembly property) (Population property) (PopulationView property) positions (Assembly property) (Population property) (PopulationView property) possible_models (STDPMechanism property) post (Projection attribute)

pre (Projection attribute) print_gsyn() (Assembly method) (Population method) (PopulationView method) print_v() (Assembly method) (Population method) (PopulationView method) printDelays() (Projection method) printSpikes() (Assembly method) (Population method) (PopulationView method) printWeights() (Projection method) ProgressBar (class in pyNN.utility) Projection (class in pyNN.neuron) pyNN.connectors module pyNN.parameters module pyNN.random module pyNN.space module PYTHONPATH, [1]

R

RandomDistribution (class in pyNN.random) randomizeDelays() (Projection method) randomizeSynapseDynamics() (Projection method) randomizeWeights() (Projection method) RandomStructure (class in pyNN.space) rank() (in module pyNN.neuron) receptor_types (Assembly property) (PointNeuron property) (Population property) (PopulationView property) (SpikeSourceArray attribute) (SpikeSourceInhGamma attribute) (SpikeSourcePoisson attribute) record() (Assembly method) (in module pyNN.neuron) (Population method) (PopulationView method) record_gsyn() (Assembly method) (Population method) (PopulationView method) record_v() (Assembly method) (Population method) (PopulationView method)

recordable (AdExp attribute) (EIF_cond_alpha_isfa_ista attribute) (EIF_cond_exp_isfa_ista attribute) (IF_cond_alpha attribute) (IF_cond_exp attribute) (IF_cond_exp_gsfa_grr attribute) (IF_curr_alpha attribute) (IF_curr_exp attribute) (Izhikevich attribute) (LIF attribute) (PointNeuron property) (SpikeSourceArray attribute) (SpikeSourceInhGamma attribute) (SpikeSourcePoisson attribute) reset() (in module pyNN.neuron) (Timer method) reverse_translate() (StandardCellType method) (StandardSynapseType method) rng (Projection attribute) rset() (Assembly method) (Population method) (PopulationView method) run() (in module pyNN.neuron) run_until() (in module pyNN.neuron)

S

sample() (Assembly method) (Cuboid method) (Population method) (PopulationView method) (Sphere method) save() (Figure method) (Projection method) save_population() (in module pyNN.utility) save_positions() (Assembly method) (Population method) (PopulationView method) saveConnections() (Projection method) scale_factors (PointNeuron property) scaled_parameters() (PointNeuron method) (StandardCellType method) (StandardSynapseType method) Sequence (class in pyNN.parameters) set() (Assembly method) (in module pyNN.neuron) (Population method) (PopulationView method) (Projection method) set_level() (ProgressBar method) set_parameters() (ACSource method) (DCSource method) (NoisyCurrentSource method) (StepCurrentSource method) setDelays() (Projection method) setSynapseDynamics() (Projection method) setup() (in module pyNN.neuron) setWeights() (Projection method)

shape (LazyArray property) (ParameterSpace property) (Projection property) show() (Figure method) simple_parameters() (PointNeuron method) (StandardCellType method) (StandardSynapseType method) size (Assembly property) (LazyArray property) (Population attribute) (PopulationView attribute) size() (Projection method) SmallWorldConnector (class in pyNN.connectors) source (Projection attribute) Space (class in pyNN.space) Sphere (class in pyNN.space) SpikePairRule (class in pyNN.standardmodels.synapses) SpikeSourceArray (class in pyNN.standardmodels.cells) SpikeSourceInhGamma (class in pyNN.standardmodels.cells) SpikeSourcePoisson (class in pyNN.standardmodels.cells) StandardCellType (class in pyNN.standardmodels) StandardSynapseType (class in pyNN.standardmodels) start() (Timer method) StaticSynapse (class in pyNN.standardmodels.synapses) STDPMechanism (class in pyNN.standardmodels.synapses) STDPTimingDependence (class in pyNN.standardmodels) STDPWeightDependence (class in pyNN.standardmodels) StepCurrentSource (class in pyNN.neuron.standardmodels.electrodes) structure (Population property) (PopulationView property) synapse_dynamics (Projection attribute)

T

target (Projection attribute) time_in_words() (Timer static method) Timer (class in pyNN.utility) translate() (StandardCellType method) (StandardSynapseType method)

translations (GSLRNG attribute) (NumpyRNG attribute) (StandardSynapseType attribute) tset() (Population method) (PopulationView method) TsodyksMarkramSynapse (class in pyNN.standardmodels.synapses)

U

uniform_int() (GSLRNG method) units (AdExp attribute) (CondAlphaPostSynapticResponse attribute) (CondBetaPostSynapticResponse attribute) (CondExpPostSynapticResponse attribute) (CurrExpPostSynapticResponse attribute) (EIF_cond_alpha_isfa_ista attribute) (EIF_cond_exp_isfa_ista attribute) (IF_cond_alpha attribute) (IF_cond_exp attribute) (IF_cond_exp_gsfa_grr attribute) (IF_curr_alpha attribute) (IF_curr_exp attribute) (Izhikevich attribute) (LIF attribute) (PointNeuron property) (SpikeSourceArray attribute) (SpikeSourceInhGamma attribute) (SpikeSourcePoisson attribute)

update() (ParameterSpace method)

V

voltage_based_synapses (Izhikevich attribute)

W

weightHistogram() (Projection method) write_data() (Assembly method) (Population method) (PopulationView method)